DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn85F

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster


Alignment Length:578 Identity:104/578 - (17%)
Similarity:181/578 - (31%) Gaps:218/578 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAYILEKM 110
            |:||       ..|..|||.:....|:..:.||:|:|.:||..||.|  .::::|.|..|  ..:
  Fly    82 SILN-------RNNFAFSPTALVSVLVALFEGSAGNTAEELRHVLQL--PNNRDVTRVGY--RDI 135

  Fly   111 NRKERQ----SKMPLEFSSADR-------------IFFANDLHV------------------TEC 140
            :|:.|.    |..||:..|.::             :|:..||.|                  |..
  Fly   136 HRRLRTYFFGSDNPLKGLSLNKGNVTVLKDFETVLMFYGYDLSVDMLSSTPANLTSDAELVNTTM 200

  Fly   141 ARNRL-----AEEVQQIDFKSQTEESRKQINDWIAKQT--------------------------- 173
            |.|..     ||.....|.:|.|||......:..|..|                           
  Fly   201 ASNTTTMEMDAETTTSKDAESTTEEPATTTTEPPATTTAEPPTTTTETPAETEATTEAPAATSGE 265

  Fly   174 --------HDQIRNMLSA----DEITPRTRLVLANAAYL-----------------KGQWLSQFK 209
                    .|:...::||    ::..|..|:..|..:.|                 |..:|...:
  Fly   266 EEAAEPAGEDEAAELVSAFVAEEDSEPLLRIQKARVSRLPTSKLQAPLKHSNPITPKPIYLPSAR 330

  Fly   210 TEKTVPMPFY----------------------TSPSNYSLVSMMQQKGT---------------- 236
            | ..:|||..                      ..|:|   :|:.::..|                
  Fly   331 T-VAMPMPMMARQVAERKPPGTRQVISIIAPSVQPAN---ISVTRKTKTARYKRHAIPAYKDLDA 391

  Fly   237 ----FLLNVDEQLRAHVLQL---------PYRTVFESQ---EKEDSSPDENSDI----------- 274
                .|.|....:..|.|..         |....||..   |..:...:.|:|:           
  Fly   392 NLFLTLFNPHTHVPHHPLHFPPPVPAAFAPITNDFEPHYIGEAAEGKSNYNTDVISHVFYLGNQQ 456

  Fly   275 -----------------------------------SMVLILPPFNSNSLEDVLSRLNADSLDDSL 304
                                               :::::||.::::.:....|.....:|....
  Fly   457 VVHTTFKVYNAVLYYKYFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMR 521

  Fly   305 KQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTSET-ISIGDSKHVAKIKV 368
            ||..||.::..:|.|:....:.|...|..||:..:|:.:.|.|..:|.|. :.:   :|:.: .:
  Fly   522 KQLKPRWVQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYV---RHIEQ-SI 582

  Fly   369 DEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDPKTIK 426
            |....|.....:...|.:..  :|.:...||||||.|.||.....:.:|...:|..::
  Fly   583 DVTIRTHPINQLKRNYGAQS--KPIQISVNHPFLFFIVDRDLDVAVMSGRILNPLNVR 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 103/569 (18%)
Spn85FNP_649965.2 SERPIN 88..>204 CDD:294093 29/119 (24%)
SERPIN <450..634 CDD:294093 34/189 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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