DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn77Bb

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:386 Identity:91/386 - (23%)
Similarity:162/386 - (41%) Gaps:76/386 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LLLAYFGSSGDTEKELAKVL--HLDWADSK---EVVRSAYILEKMNRKERQSKMPLEFSSADRIF 130
            :::.|.|:.|.|..||..||  ::|:...:   |.||:.:.|...|.|    ...|.::..|.: 
  Fly    14 MIMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAYHYLNSENTK----LFSLRYAYYDDV- 73

  Fly   131 FANDLHVTECARNRLAEEVQQ------------IDFKSQTEESRKQINDWIAKQTHDQIRNMLSA 183
              .||.:.:...:.:.|.|.:            :||   .:.:...|||.|.|.:|.:|.:..|.
  Fly    74 --GDLELVKGYNSVVLEGVGEGNVVLREGRPRGVDF---DQGASIIINDDIDKASHAKIFSSYSR 133

  Fly   184 DEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYT---SPSNYSLVSMMQQKGTF-LLNVDEQ 244
            ........::....:|.|.:|...|...:|....||.   ||:  ..|.||.|.|.: .:|..:.
  Fly   134 RSFNSTVTVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPA--GKVEMMVQTGKYAYVNNVKG 196

  Fly   245 LRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLN-------ADSLDD 302
            |:|.||:||:               ...::.|:::||. :|..:..||.:|.       .:.|:.
  Fly   197 LQADVLELPF---------------GEHELVMIVLLPK-SSQGVNLVLYQLKNLGLHRLLEKLEA 245

  Fly   303 SLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTSETISIGDS------- 360
            |..:.   ::||.||||:....|.|...:...|::.:.::    |.||....|:||..       
  Fly   246 SKNET---DVEVKLPKFDTRSVLSLEDTVYDAGLTDLRND----FADLDKLLIAIGHRGACLTLY 303

  Fly   361 KHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRD 421
            ...|:|.|||||...|..      :.:......||..|.||.:::..:..:.::.:|::|:
  Fly   304 HQFARIVVDEEGLPNAVP------QKSSGKNNIKFHVNRPFAYLVLQKKHKLLIHSGVFRE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 90/382 (24%)
Spn77BbNP_649206.1 SERPIN 13..356 CDD:238101 90/382 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446251
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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