DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Ea and Spn77Ba

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001287128.1 Gene:Spn77Ba / 40234 FlyBaseID:FBgn0262057 Length:450 Species:Drosophila melanogaster


Alignment Length:421 Identity:118/421 - (28%)
Similarity:194/421 - (46%) Gaps:67/421 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DQRLNLYKGQQNFAVSMLN--VIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLD 93
            |..:::.:|.|:||:.:|.  .:.....|::...||:|.:..|:|.|.||.|:|..:|.|.|.::
  Fly    67 DVLVSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKSLRIN 131

  Fly    94 WADSKEVVRSAYILEKMNRKERQSKM-----PLEFSSADRIFFANDLHVTECARNRLAEEVQ--- 150
            ..|.|  :|.||       |...|.:     .:|.::...|:......:    :|...:.:|   
  Fly   132 VEDEK--LRGAY-------KVWSSFLNITTSTIEVATLQAIYTGKGYPI----KNNYRDAIQNYN 183

  Fly   151 ----QIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTE 211
                ::||.|  .:|..|||:...:.|...|...:...::. ..::.|.::.|.||||...|...
  Fly   184 VQPMEVDFYS--PDSVIQINEDTNRTTRGLIPYTILPQDVY-GAKMFLLSSLYFKGQWKFPFNKT 245

  Fly   212 KTVPMPFYT-SPSNYSLVSMMQQKGTF--LLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSD 273
            .|...||:: |......:.||.|:..|  :.|| |.|..:||:|||.|    |::          
  Fly   246 LTREEPFFSESGEVIGKIPMMVQEANFAYVSNV-EGLDGYVLELPYGT----QDR---------- 295

  Fly   274 ISMVLILPPFNSNSLEDVLSRLNADSLDDSLKQ--------AMPREIEVSLPKFEFEQRLELNPI 330
            ::|:::||. ....|.||.:.|.|..|...|::        :...|:||.:|||.......|..:
  Fly   296 LAMIVVLPK-RGFKLNDVANNLKALGLRPILQRLAAFRNRASEDNEVEVMMPKFVTATDFTLKGV 359

  Fly   331 LAKMGVSKMFDESVATFDDLTSETISIGDSK---HVAKIKVDEEGSTAAAATVLFTYRSARPVEP 392
            |.:||:..:|||:.|..|.::|...    :|   |..||.|||:|:||.|.|   ....|....|
  Fly   360 LIQMGIRDLFDENTANLDRMSSGLF----AKLVVHSTKIIVDEQGTTAGAVT---EAALANKATP 417

  Fly   393 AKFECNHPFLFVIYDRTSRSILFTGIYRDPK 423
            .||..|.||.::|.::.:..:||.|..|:||
  Fly   418 PKFLLNRPFQYMIVEKATGLLLFAGQVRNPK 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 114/407 (28%)
Spn77BaNP_001287128.1 SERPIN 75..444 CDD:238101 114/407 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446253
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.