DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpinf1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_989086.1 Gene:serpinf1 / 394686 XenbaseID:XB-GENE-945026 Length:409 Species:Xenopus tropicalis


Alignment Length:402 Identity:90/402 - (22%)
Similarity:157/402 - (39%) Gaps:54/402 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEV 100
            |.....||...:..:.....||.|:..||.|...:|.....|....||..:.:.|:.|..:..||
 Frog    44 LASSASNFGYDLYRMQANKNPNSNIIISPLSIATSLSSLSLGGGQRTESLIQRSLYYDLLNDPEV 108

  Fly   101 ------VRSAYILEKMNRK-------ERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQI 152
                  :.:::..:....|       ||:.::.::|.:....|:.|...|               
 Frog   109 HATYKDLLASFTSQASGLKSTWRIMLERRLRLRMDFVTQVEKFYGNKPKV--------------- 158

  Fly   153 DFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMP 217
             ....|....::.||:|.|||..::.....  ||.....::|....||||||..:|...:||...
 Frog   159 -LTGSTRLDLQEANDFIQKQTQGKVVKFFK--EIPTSVSILLLGTTYLKGQWAYKFNPRETVQRE 220

  Fly   218 FYTSPSNYSLVSMMQQKG-TFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILP 281
            |:........|.||..|. .....:|......::|||.                ...:|::..||
 Frog   221 FHLDEQTSVTVPMMSSKNIPVRYGLDSDFNCKIVQLPL----------------TGGVSIMFFLP 269

  Fly   282 PFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVAT 346
            ...:.:|..:...|.::.:.|..:...|..:.:|:||.:.....||...|.:..:..:|  :...
 Frog   270 NTVTQNLTMIEEGLTSEFVHDIDQALQPINLVLSVPKLKLNYEAELKEALQESKLQSLF--ATPD 332

  Fly   347 FDDLTSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSR 411
            |..::|:.:.:....|.|.::::|||    |.|......|.|...|.::..:||||||:....:.
 Frog   333 FSKISSKPLKLSYVVHKATLELNEEG----AETAPKPEDSHRNYFPLEYHLDHPFLFVLRANDNG 393

  Fly   412 SILFTGIYRDPK 423
            ::||.|...|||
 Frog   394 ALLFIGKVMDPK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 86/393 (22%)
serpinf1NP_989086.1 serpinF1_PEDF 31..402 CDD:381008 87/397 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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