DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpina11

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001008776.1 Gene:Serpina11 / 362774 RGDID:1359239 Length:462 Species:Rattus norvegicus


Alignment Length:451 Identity:99/451 - (21%)
Similarity:178/451 - (39%) Gaps:117/451 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVL--HLDWADSKEVVRSA 104
            |||:.:...:.:..|. |:.|||.|....:.|...|:..||:.::.:.|  :|....:.::.|..
  Rat    56 NFALRLYKQLAEEIPG-NILFSPVSLSSTVALLSLGAHADTQAQILQSLGFNLTETPAADIHRGF 119

  Fly   105 YIL--------EKMNRK-------ERQSKMPLEF-SSADRIF--FANDLHVTECARNRLAEEVQQ 151
            ..|        .|:..|       :||.|....| .||..::  .|...:.||.|          
  Rat   120 QSLLHTLDLPSPKLELKLGHSLFLDRQLKPQQRFLDSAKELYGALAFSANFTEAA---------- 174

  Fly   152 IDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQW---LSQFKTEKT 213
                    .:.:||||.:.|||:.|:...|  .|....|.:||.|..:.|.:|   ..:::|.| 
  Rat   175 --------ATGQQINDLVRKQTYGQVVGCL--PEFDRDTLMVLLNYIFFKAKWKHPFDRYQTRK- 228

  Fly   214 VPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVL 278
             ...|:........:.||:||.......|::....|||:.|                :....::|
  Rat   229 -QESFFVDQRLQLRIPMMRQKEMHRFLYDQEASCTVLQIEY----------------SGTALLLL 276

  Fly   279 ILPPFNSNSLEDVLSRLNADSLDDSLKQAMPRE-------------------------------- 311
            :||  :...::.|.:.|..::|....::.:||:                                
  Rat   277 VLP--DPGKMQQVEAALQPETLRRWGQRFLPRKAQAGGAGNGGLHWDRVNEFPQNRVGKLSLKHL 339

  Fly   312 --------IEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLT------SETISIGDSKH 362
                    :::.||:|.......|..||..:|:|.:||...    ||:      ::|:|  ...|
  Rat   340 QMTQTWSLLDLHLPRFSVSATYNLEEILPLVGLSSLFDVEA----DLSGIMGQLNKTVS--RVSH 398

  Fly   363 VAKIKVDEEGSTAAAATVLFTYRSARPVEPAKF-ECNHPFLFVIYDRTSRSILFTGIYRDP 422
            .|.:.::|:|:.||||:.|.:...:..:..|.. ..|.|||.::::.|::|:||.|...:|
  Rat   399 KAVVDMNEKGTEAAAASGLLSQPPSLNMTSAPHAHFNRPFLLLLWEVTTQSLLFLGKVVNP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 98/449 (22%)
Serpina11NP_001008776.1 serpinA11 50..462 CDD:381025 99/451 (22%)

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