DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn47C

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_610633.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster


Alignment Length:409 Identity:97/409 - (23%)
Similarity:180/409 - (44%) Gaps:73/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHL--------------D 93
            ||.::...:....|..|:..||.....|:.|.:.|:.|.:..||...|.|              .
  Fly    18 FARNLFRALNDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVSNKSEVAKQHAES 82

  Fly    94 WAD---------SKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEV 149
            |.|         :..:|...|:.|:...:...:.|.|||.:|                     |.
  Fly    83 WTDECSCAKKGVALRLVTRLYVNEEEKIRTDFNDMALEFFNA---------------------EA 126

  Fly   150 QQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTV 214
            ..:::.: .|:|.|::|.|:.|.|...:||:.:.:.....:.::|.|:.:.:.:|...|..:.|.
  Fly   127 YSLNYLN-PEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVNSLFFRAKWNKIFPQQLTQ 190

  Fly   215 PMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLI 279
            ...|:.:|.....||||:|.|.|.....::|::.:||||:               |.|:::|::|
  Fly   191 IDDFWINPRQRMEVSMMRQIGQFRYGESKKLKSQILQLPF---------------ERSNLTMMII 240

  Fly   280 LPPFNSN--SLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDE 342
            ||.....  .||:.|.:|:   :::...:::.:|::|::|||..|..::|...|.|||::.:||.
  Fly   241 LPTAIDGLPELEEKLGQLD---MNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGINSVFDA 302

  Fly   343 SVATFDDL----TSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLF 403
            ..|...||    |.:.||  :::|...:.|.|.|...|....:......:..:...|:.:.||:|
  Fly   303 GQADLSDLFEMKTPQKIS--EARHKVFLNVTEFGCEVAPEAEVQPEVLKKNPDRKFFKADRPFVF 365

  Fly   404 VIYDRTSRSILFTGIYRDP 422
            .|.||  :::.|.|.:..|
  Fly   366 AIRDR--KNVYFVGHFVKP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 96/407 (24%)
Spn47CNP_610633.1 serpin42Dd-like_insects 13..382 CDD:381070 96/407 (24%)

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