DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpind1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_878300.1 Gene:serpind1 / 359841 ZFINID:ZDB-GENE-030711-2 Length:507 Species:Danio rerio


Alignment Length:415 Identity:109/415 - (26%)
Similarity:172/415 - (41%) Gaps:66/415 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QRLNLYKGQQNFAV--SMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDW 94
            ||:|:...:..|.:  .:.|.:.|:   :|:..:|.....|:.:...|...:|:::|.       
Zfish   132 QRINVVNARFGFRLYRKLRNRLNQT---DNILLAPVGISIAMGMMGLGVGPNTQEQLF------- 186

  Fly    95 ADSKEVVRSAYILEKMNRKERQSKMPLEFSSADRIF---------FANDLHVTE----------C 140
                :.|..|..:...|..:..:...|......|:|         ..|||:|..          .
Zfish   187 ----QTVGFAEFVNASNHYDNSTVHKLFRKLTHRLFRRNFGYTLRSVNDLYVKRNVQIQDSFRAD 247

  Fly   141 ARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWL 205
            |:.....|.|.:||....  ...:.|..|.|.|...|:..|.:  :.|...::|.|..|.||.|.
Zfish   248 AKTYYFAEPQSVDFADPA--FLVKANQRIQKITKGLIKEPLKS--VDPNMAVMLLNYLYFKGTWE 308

  Fly   206 SQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDE 270
            .:|..|.|....|..:......|.|||.||::|...|.:|...:|||||.               
Zfish   309 QKFPKELTHHRQFRVNEKKQVRVLMMQNKGSYLAAADHELNCDILQLPYA--------------- 358

  Fly   271 NSDISMVLILPPFNS--NSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAK 333
             .:|||::.:|...|  .|||..:|   ...::..|.....|..||..|:|:.||..:|...|.:
Zfish   359 -GNISMLIAVPQKLSGMRSLEQEIS---PTLVNKWLSNMTNRTREVVFPRFKLEQNYDLIEHLKE 419

  Fly   334 MGVSKMFDESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVE-PAKFEC 397
            ||::.:|.|. ..|..:|||.:.|...||...|.|:|||:.|||    .|:....|:. ..:|..
Zfish   420 MGMTDIFTEK-GDFSPMTSEKVIINWFKHQGSITVNEEGTEAAA----MTHIGFMPLSTQTRFIV 479

  Fly   398 NHPFLFVIYDRTSRSILFTGIYRDP 422
            :.||||:||:..:..::|.|...||
Zfish   480 DRPFLFLIYEHRTGCVVFMGRVVDP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 104/403 (26%)
serpind1NP_878300.1 HCII 61..505 CDD:239002 109/415 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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