DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn43Ad

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster


Alignment Length:431 Identity:87/431 - (20%)
Similarity:174/431 - (40%) Gaps:56/431 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LMAVLPAIALAGLCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALL 72
            |.|:|..:|:|....|:   |.|..|.........|.:.:...:..:.|:.||..||.....||.
  Fly     7 LSALLVGLAIALTLPVD---GELLARSPASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALS 68

  Fly    73 LAYFGSSGDTEKELAKVLHLDWADSKEVVRSAYILEKMNRKERQS-------KMPLEFSSADRIF 130
            |.|..||.:...:|.:.|.|..|...::....:  |.:....:||       ::..:..:..|..
  Fly    69 LLYAESSSEYGSQLRQALELTHASHPKLAVQDF--ETLLTDLKQSAAIGCRLRLLSDLYAQQRFT 131

  Fly   131 FANDLHVTECARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITP----RTR 191
            | |..:..|....|:.....::.::| ...:.:.||.....:::..:..::||.::..    .|.
  Fly   132 F-NFRNEFETLAARMGVGCHRLSWES-ASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTP 194

  Fly   192 LVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRT 256
            .:..:....:..|...|...:|..:.|:...:...||..|..:..:.......|.|.::::|:.|
  Fly   195 FLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFAT 259

  Fly   257 VFESQEKEDSSPDENSDISMVLILP--PFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKF 319
                           :|:.|:::.|  |.....||..|::.:...|...|::   |::.::|||.
  Fly   260 ---------------ADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQLEE---RKVALTLPKL 306

  Fly   320 EFEQRLELNPILAKMGVSKMFDESV---ATFDD-LTSETISIGDSKHVAKIKVDEEGSTAAAATV 380
            ......:|..:|.::|::|:|...|   ..|.. |:|....:|.......:::.|:|..|..:  
  Fly   307 RVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNADDS-- 369

  Fly   381 LFT----YRSARPVEPAKFECNHPFLFVIYDRTSRSILFTG 417
             |:    :|.|.|:     ..||||.:.|  ...:::|.:|
  Fly   370 -FSFGDLFRRALPL-----VINHPFFYAI--GNGKTLLLSG 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 78/400 (20%)
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 78/400 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446284
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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