DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and CG43366

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster


Alignment Length:530 Identity:98/530 - (18%)
Similarity:185/530 - (34%) Gaps:137/530 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHILSISLMAVLPAIAL----AGLCGVEPDAGLLDQRLNLYKGQQN-FAVSMLNVI--RQSTPNE 58
            :::::.|..:..|.:.|    ....|:|....::|:.|..:....| .|.|....|  .:.:...
  Fly  1642 INLMASSTQSTRPPVKLDPSPESSQGLEASTAMMDEDLQSFARLCNELAFSYWRAITSEKISSAR 1706

  Fly    59 NVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLD-------------------WADSKEVVRSA 104
            ::..||::....|.:.:.|:.|.|..|:.::|.||                   .|...::..:|
  Fly  1707 SLVISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITNSVEQASDSDIATAA 1771

  Fly   105 YILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQTEESRKQINDWI 169
            ::.|..:.:.....:|         ||      .|..:...|..|::::|....:..|::.|..:
  Fly  1772 FVREIFSDRANGKILP---------FF------KEKTQQLYAGHVEEVNFHVVNDIVRRRTNLLV 1821

  Fly   170 AKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPS--NYSLV---S 229
            .:.|..::...|..:.:.....|...:|...:........|::...|.|...|:  ...||   :
  Fly  1822 KRHTMGKVLEYLRTNSVWVNGPLATISANLFQTDCSHGSTTDRDGEMFFQVHPTVRQRRLVPIPA 1886

  Fly   230 MMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSN-SLEDVLS 293
            ::.:.| ||...:..|.|.|:               |.....:.:|.|.::|...|: |..|.|.
  Fly  1887 VLYRSG-FLAGYEPSLDATVV---------------SFGRVQNTVSTVYVMPGHQSSISPMDNLD 1935

  Fly   294 RLNADSLDDSL--KQAMPR---------EIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATF 347
            ||....::.:.  |||..|         .:||.||:|.....:..:..|.|||:..:|....|..
  Fly  1936 RLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLFKSDFADL 2000

  Fly   348 DDLT---------SETISI------GDSK-----HVAKI-------------KVDEEGSTAAAAT 379
            ..||         |:.|.|      |:.|     ||...             ..|::...::...
  Fly  2001 RGLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVDATDDDAFDSSERV 2065

  Fly   380 VLF--------------------TY---------RSARPVEPAKFECNHPFLFVIYDRTSRSILF 415
            |.|                    .|         |.||..:..:...:.|||:.:....:..|||
  Fly  2066 VDFGSLVQESALGRGFYDDLLDPKYLELPLPLRPRQARVPDAPRLRFDKPFLYFVRHNPTGMILF 2130

  Fly   416 TGIYRDPKTI 425
            .|.: :|:.:
  Fly  2131 MGRF-NPRLL 2139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 90/486 (19%)
CG43366NP_610188.2 MDN1 956..>1505 CDD:444083
Serpin 1687..2136 CDD:459662 90/480 (19%)
Blue background indicates that the domain is not in the aligned region.

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