DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Ea and LOC3290412

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_003435746.2 Gene:LOC3290412 / 3290412 VectorBaseID:AGAMI1_012581 Length:391 Species:Anopheles gambiae


Alignment Length:400 Identity:85/400 - (21%)
Similarity:155/400 - (38%) Gaps:95/400 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NVFFSPYSTYHALLLAY--------------FGSSGDT------EKELAKVLHLDWADSKEVVRS 103
            |...|||....||.:.|              ||...|.      ::.||:.||    |.:.:...
Mosquito    47 NCAVSPYHVRLALSMFYPLAGAAVQEDFQVAFGLPEDVHAAIEQQQRLAQQLH----DGQHLKAL 107

  Fly   104 AYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQTEE--SRKQIN 166
            :::|     .|...::..||   :|:|     |.|      ....|:.:|.   |::  |...:|
Mosquito   108 SFVL-----VEETLRLDSEF---ERLF-----HRT------FQTTVEPVDL---TDDIPSALAVN 150

  Fly   167 DWIAKQTHDQIRNMLSADEI---TPRTRLVLANAAYLKGQWLSQFKTEKTV--PMPFYTSPSNYS 226
            .:. ::.:.:|.:.:...::   .|..:|:|.:...:......:|....|.  ...|..:|:  .
Mosquito   151 SFY-QRANTEIEDFIGEGDVFSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINAPT--Q 212

  Fly   227 LVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDV 291
            .||.|.........:..:||..|:.:|:              |..|.:|| |:|.|::...|..:
Mosquito   213 RVSTMHTTAFVRRCLHNELRCKVVDMPF--------------DAASGLSM-LVLLPYDGTELRQI 262

  Fly   292 LSRL---NADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFD-ESVATFDDLTS 352
            ::.:   :...:|:.|:...   .::.||||...::.:....|.|:|...:|: :.:..|.| :.
Mosquito   263 VNSITPAHLAQIDERLQSCW---TDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHD-SG 323

  Fly   353 ETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFE--CNHPFLFVIYDRTSRSILF 415
            .|...|..:| ..:.|.|.||...|.          |..|::||  .|.||:|:|......::|.
Mosquito   324 RTRLNGFIQH-CYLAVSESGSGIPAP----------PDTPSEFEFHANRPFMFLIRRTMDGNVLQ 377

  Fly   416 TG---IYRDP 422
            .|   .|.||
Mosquito   378 VGNFSKYIDP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 83/398 (21%)
LOC3290412XP_003435746.2 None

Return to query results.
Submit another query.