DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpinc1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_878283.1 Gene:serpinc1 / 321545 ZFINID:ZDB-GENE-030131-264 Length:450 Species:Danio rerio


Alignment Length:401 Identity:120/401 - (29%)
Similarity:192/401 - (47%) Gaps:34/401 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LYKGQQNFAVSMLNVIRQSTPN-ENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKE 99
            |.|....||:|:...:.:...| ||:|.||.|...|..:...|:...|.::|.||...|....|.
Zfish    66 LSKANSRFALSLFKQLAEGKSNDENIFLSPISISTAFAMTKLGACNTTLEQLMKVFQFDTIKEKT 130

  Fly   100 VVRSAYILEKMN-RKERQSKMPLEFSSADRIFFANDL-------HVTECARNRLAEEVQQIDFKS 156
            ..:..:...|:| |..|:.....|..||:|:|.....       |::|..   ...::..:|||.
Zfish   131 SDQVHFFFAKLNCRLYRKKHETTELISANRLFGDKSTTFNETFQHISETV---YGAKLMPLDFKE 192

  Fly   157 QTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTS 221
            :.|.||..||:|||.:|.::|::.|....|...|.|||.||.|.||||.::|..:..:.:.|:.|
Zfish   193 KPEASRITINEWIANKTENRIKDTLPEGSIDTNTILVLVNAIYFKGQWKNKFDKQNVMKLDFHVS 257

  Fly   222 PSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSN 286
            |::...|.||.|:..|......:.:..:|:|||               ...||:||||| |....
Zfish   258 PTHKCPVPMMYQEKKFQYAKIPEDKVKILELPY---------------NGGDITMVLIL-PIEGA 306

  Fly   287 SLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLT 351
            :|.:|::.:|...|...|.......:.|.:|:|..|....|...|.|||:..:|..:.|:...:.
Zfish   307 TLSEVVANMNLKKLVGWLHAMKETTVAVQIPRFRVEDSFSLKEQLTKMGLEDLFSPANASLPGMV 371

  Fly   352 SE----TISIGDSKHVAKIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFECNHPFLFVIYDRTSR 411
            ::    .:.|.|:.|.|.::|:||||.|:||| |:.|.||.. :...:|..:.|||..|.:.:..
Zfish   372 ADAEGPNLFISDAYHKAFLEVNEEGSEASAATAVVATGRSLN-IFREQFVADRPFLLFIRESSIN 435

  Fly   412 SILFTGIYRDP 422
            :::|||...:|
Zfish   436 ALIFTGRVANP 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 117/393 (30%)
serpinc1NP_878283.1 antithrombin-III_like 62..443 CDD:239000 119/396 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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