DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn75F

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001036614.1 Gene:Spn75F / 317912 FlyBaseID:FBgn0052203 Length:356 Species:Drosophila melanogaster


Alignment Length:399 Identity:92/399 - (23%)
Similarity:167/399 - (41%) Gaps:103/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAYI 106
            ||.:::...:.:.....|..:||.:...||.|.|......|:::|...|.|...:.:|:: |.: 
  Fly    21 NFEINLTKQLSKGRLARNFVYSPIAIRQALGLLYLSKDNVTDQQLESALQLTGLNQEEII-SLF- 83

  Fly   107 LEKMNRKERQSKMPLE-FSSADRIFFANDL----HVTECARNRLAEEVQQIDF---KSQTEESRK 163
                  ||.:.|:..| |:..:||:.:.|.    ::|:.:.| |..||:.:.|   :|...|.:|
  Fly    84 ------KEAREKVAQEQFTMGNRIYLSPDYNASPNITQLSEN-LGVEVKNMTFSGDQSAASEIKK 141

  Fly   164 QINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQ--FKTEKTVPM------PF-Y 219
            .:|.||.|..    .|:...::|:..|::|..........|.::  ..|.:|..:      || |
  Fly   142 WLNKWIGKAG----GNLFGKNDISQTTQIVAVQGMSYSCVWKNRETALTNRTFTLLRQNKKPFVY 202

  Fly   220 TSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILP-PF 283
            |:...|:...|     .|..|  :|:|.  :.:|::               |||:.|:::|| | 
  Fly   203 TTQMMYTEAPM-----DFFNN--DQVRG--VMVPFK---------------NSDMGMLVLLPRP- 242

  Fly   284 NSNSLEDVLSRLNADSLDDSLKQAMPR--EIEVSLPKFEFEQRLELNPILAKMGVSKMF-DESVA 345
             ..|.:.:|.     |||..||..:.|  :..:.||||:..:.::||..|..:|:..:| :.:.|
  Fly   243 -RYSTQQILY-----SLDTILKIKLRRSKKTHLFLPKFKVSESVDLNMALKALGIQNLFTNTNAA 301

  Fly   346 TFDDLTS---------ETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPF 401
            .|....|         .||.:||.       .|:.        |::.              |..|
  Fly   302 NFKQYNSFDADQNRVLMTIDVGDD-------FDDR--------VVYV--------------NRGF 337

  Fly   402 LFVIYDRTS 410
            :||:.|:::
  Fly   338 VFVVKDKST 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 92/399 (23%)
Spn75FNP_001036614.1 SERPIN 21..353 CDD:294093 92/399 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446291
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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