Protein Alignment Spn88Ea and RGD1562844

DIOPT Version :9

• Sequence 1: NP_524954.2
• Gene: Spn88Ea / 49804
• FlyBaseID: FBgn0028984
• Length: 427
• Species: Drosophila melanogaster
• Sequence 2: NP_001333297.1
• Gene: RGD1562844 / 306892
• RGDID: 1562844
• Length: 296
• Species: Rattus norvegicus
• Alignment Length: 289
• Identity: 90/289 - (31%)
• Similarity: 141/289 - (48%)
• Gaps: 45/289 - (15%)

  Fly   106 ILEKMNRKERQSKMPLEFSSADRIFFANDLHV-----TECAR--NRLAEEVQQIDFKSQTEESRK 163
            :.:|:|:.||...:.:    |:.||......|     ..|.|  |   .|::|:.|....|||||
  Rat    23 LFKKLNKSERYFSLRM----ANGIFVDKTCEVLPTFKESCLRFYN---SEMEQLSFAEAAEESRK 80

  Fly   164 QINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLV 228
            .:|.|::|||..:|..:|..|.:..:|||||.||.|||..|..||....|..|||..:.:....|
  Rat    81 HVNTWVSKQTEGKIPELLPDDSVDFQTRLVLVNALYLKATWGRQFDEGSTREMPFKINKNETRPV 145

  Fly   229 SMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDS------SPDENSDISMVLILPPFNSNS 287
            .||.|:|.|.....:::.|.:|.:||        |.|.      .|||:.|||.|
  Rat   146 QMMYQEGIFCYKYVKEVPASLLMIPY--------KGDELCFLVLLPDESVDISKV---------- 192

  Fly   288 LEDVLS--RLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDL 350
             |:.|:  :|.|.:..|::...   .:||.||||:.|:..:|..:|.::|:...|:|:.|....:
  Rat   193 -EEELTFEKLTAWTQPDTMSYT---HVEVFLPKFKLEEDYDLKSLLQRLGIVDAFEETKADLSAM 253

  Fly   351 TSE-TISIGDSKHVAKIKVDEEGSTAAAA 378
            ..| .:.:....|.:.::|:|:|:.||||
  Rat   254 APERNLCVSKFVHKSVVEVNEKGTEAAAA 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spn88Ea	NP_524954.2	SERPIN	39..419	CDD:238101	90/289 (31%)
RGD1562844	NP_001333297.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910