DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinc1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:464 Identity:131/464 - (28%)
Similarity:205/464 - (44%) Gaps:63/464 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILSISLMAVLPAIALAG-----LCGVEP-------------------DAGLLDQRL--------- 34
            :||:.|:..|......|     :|..:|                   :..:|:|::         
  Rat    18 LLSLLLIGALGCAVCHGNPVDDICIAKPRDIPVNPMCIYRSPAKKATEEDVLEQKVPEATNRRVW 82

  Fly    35 NLYKGQQNFAVSMLNVIRQS-TPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSK 98
            .|.|....||.:....:..| ..|:|:|.||.|...|..:...|:..:|.|:|.:|...|....|
  Rat    83 ELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTLKQLMEVFKFDTISEK 147

  Fly    99 EVVRSAYILEKMN-RKERQSKMPLEFSSADRIFFANDLHVTECARNRLAE-----EVQQIDFKSQ 157
            ...:..:...|:| |..|::.......||:|:|....|...|..:: ::|     ::|.:|||..
  Rat   148 TSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLTFNESYQD-VSEIVYGAKLQPLDFKEN 211

  Fly   158 TEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSP 222
            .|:||..||:|:|.:|..:|::::....|...|.|||.|..|.||.|.|:|..|.|...||:...
  Rat   212 PEQSRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEPFHKVD 276

  Fly   223 SNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNS 287
            ....||.||.|:|.|               .||.|.|..:..: .|.:..||:||||||. ...|
  Rat   277 GQSCLVPMMYQEGKF---------------KYRRVGEGTQVLE-MPFKGDDITMVLILPK-PEKS 324

  Fly   288 LEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTS 352
            |..|...|..:.|.:.|.:.....:.|.:|:|..|....|...|..||:..:|....:....:.:
  Rat   325 LAKVEQELTPELLQEWLDELSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIA 389

  Fly   353 E---TISIGDSKHVAKIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSI 413
            |   .:.:.|:.|.|.::|:||||.|||:| |:.|.||..| ....|:.|.|||.:|.:....:|
  Rat   390 EGRDDLFVSDAFHKAFLEVNEEGSEAAASTSVVITGRSLNP-SRVTFKANRPFLVLIREVALNTI 453

  Fly   414 LFTGIYRDP 422
            :|.|...:|
  Rat   454 IFMGRVSNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 119/390 (31%)
Serpinc1NP_001012027.1 antithrombin-III_like 80..459 CDD:239000 121/397 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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