DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinb13

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_063128285.1 Gene:Serpinb13 / 304690 RGDID:1304661 Length:390 Species:Rattus norvegicus


Alignment Length:398 Identity:117/398 - (29%)
Similarity:190/398 - (47%) Gaps:59/398 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRS--AYILEKMNRKERQ- 116
            |.:.||||||.....|:.:...|:.|.|..||.|||:.:.......::|  ..::||......| 
  Rat    22 TSDGNVFFSPLGISTAIGMILLGTQGATASELQKVLYSEQGTGSSRLKSEEKEVIEKTEEIHHQF 86

  Fly   117 SKMPLEFSSADRIFFANDLHVTECARNRLAEE--------------------VQQIDFKSQTEES 161
            .|:..|.|...:.:   ||.::    |||..|                    ::.:||.:..:||
  Rat    87 QKLLTEISKPTKDY---DLIIS----NRLYGERTYLFLQKYIDYVEKYYHASLEPVDFVNAADES 144

  Fly   162 RKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYS 226
            ||:||.|:..||:::::::.....:...|:|||.|..|.||.|..:||.|.|....|:.:.:...
  Rat   145 RKKINSWVESQTNEKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEEDFWLNKNISK 209

  Fly   227 LVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDV 291
            .|.||.|..:|...:.|.|:|.::.:||:               |||.||.::||. :.:.||.:
  Rat   210 PVQMMAQCSSFSFTLLEDLQAKIVGIPYK---------------NSDFSMFVLLPN-DIDGLEKI 258

  Fly   292 LSRLNADSLDD-----SLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLT 351
            :.:|:.:.|.:     .|||   |::::.||:.:.|:..:|.|.|..:|:...|.|. |.:..::
  Rat   259 IDKLSPEKLVEWTSPGQLKQ---RKVDLRLPRLKVEETYDLQPTLEAVGIHSAFSEH-ADYSGMS 319

  Fly   352 SET-ISIGDSKHVAKIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSIL 414
            :.: :...:..|.:.:.|.|||..|.|.| |.|...||...|  ...|||||||.:..|.|.|||
  Rat   320 AHSGLQTQNFLHRSFLVVTEEGVEATAGTGVGFKVLSAASCE--LVHCNHPFLFFVRHRESDSIL 382

  Fly   415 FTGIYRDP 422
            |.|.:..|
  Rat   383 FFGRFSSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 116/396 (29%)
Serpinb13XP_063128285.1 None

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