DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinb6a

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:416 Identity:123/416 - (29%)
Similarity:197/416 - (47%) Gaps:67/416 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSK- 98
            :|.:|...||:.:|..:.:.:.| |:|.||.|...||.:.:.|:.|.|..::.:.|.||..... 
  Rat    24 HLQEGNGIFALKLLKTLSEDSSN-NIFLSPISISAALTMVFMGAKGMTASQMVQTLSLDKCSGNG 87

  Fly    99 -------------EVVRSA--YILEKMNR--KERQSKMPLEFSSADRIFFANDLHVTECARNRLA 146
                         ||.::.  |:|:..||  .|:...:...|..|.|.|:              .
  Rat    88 GGDVHQGFQSLLAEVNKTGTQYLLKTANRLFGEKTCDILASFKDACRKFY--------------E 138

  Fly   147 EEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTE 211
            .|::::|||..||:||::||.|:||:|.|:|:.:|:...:.|.|.|||.||.|.||.|..||..|
  Rat   139 AEMEELDFKGDTEQSRQRINTWVAKKTEDKIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKE 203

  Fly   212 KTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISM 276
            .|...||..|.:....|.||..|.||.:....::...:|.|||               ..::::|
  Rat   204 HTREKPFKVSKTEEKPVQMMFMKSTFKMTYIGEIFTKILLLPY---------------AGNELNM 253

  Fly   277 VLILPPFNSN--------SLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAK 333
            :::||..:..        :.|..:.....|.||:       .|:||.||:|:.|:..::..:|.|
  Rat   254 IIMLPDEHIELKTVEKELTYEKFIEWTRLDMLDE-------EEVEVFLPRFKLEENYDMKVVLGK 311

  Fly   334 MGVSKMFDESVATFDDLTS-ETISIGDSKHVAKIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFE 396
            :|::..|.|..|.|..:.| :.:.:....|.|.::|:|||:.|.||| ...|.|..| ..| :|.
  Rat   312 LGMTDAFMEGRADFSGIASKQGLFLSKVIHKAFVEVNEEGTEAVAATGSTITMRCLR-FTP-RFL 374

  Fly   397 CNHPFLFVIYDRTSRSILFTGIYRDP 422
            .:|||||.|....::.|||.|.:..|
  Rat   375 ADHPFLFFIQHVKTKGILFCGRFSSP 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 122/413 (30%)
Serpinb6aXP_006253933.1 serpinB6_CAP 22..400 CDD:381031 122/414 (29%)

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