DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinf1

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_808788.1 Gene:Serpinf1 / 287526 RGDID:631369 Length:418 Species:Rattus norvegicus


Alignment Length:426 Identity:96/426 - (22%)
Similarity:168/426 - (39%) Gaps:52/426 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAIALAGLCGVEPDAGLLDQRLN-LYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYF 76
            ||....|...||.|.......:| |.....||...:..:...:....|:..||.|...||.....
  Rat    30 PAPDSTGEPVVEEDDPFFKAPVNKLAAAVSNFGYDLYRLRSGAVSTGNILLSPLSVATALSALSL 94

  Fly    77 GSSGDTEKELAKVLHLDWADSKEVVRSAY--ILEKMNRKERQSKMPLEFSSADRIFFANDLHVTE 139
            |:...||..:.:.|:.|..::.: :.|.|  :|..:...|:      .|.||.||.|...|.|..
  Rat    95 GAEQRTESVIHRALYYDLINNPD-IHSTYKELLASVTAPEK------NFKSASRIVFERKLRVKS 152

  Fly   140 C----------ARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVL 194
            .          .|.|:.....:||.        ::||:|:..|...:|..  |..|:.....::|
  Rat   153 SFVAPLEKSYGTRPRILTGNPRIDL--------QEINNWVQAQMKGKIAR--STREMPSALSILL 207

  Fly   195 ANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQ-KGTFLLNVDEQLRAHVLQLPYRTVF 258
            ...||.||||.::|.:.||....|:........|.||.. |......:|..|...:.|||.    
  Rat   208 LGVAYFKGQWATKFDSRKTTLQDFHLDEDRTVRVPMMSDPKAILRYGLDSDLNCKIAQLPL---- 268

  Fly   259 ESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQ 323
                        ...:|::..||...:.:|..:...|.::.:.|..::....:..:::||.:...
  Rat   269 ------------TGSMSIIFFLPLTVTQNLTMIEESLTSEFVHDIDRELKTIQAVLTVPKLKLSY 321

  Fly   324 RLELNPILAKMGVSKMFDESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSAR 388
            ..::...|..|.:..:|:.  ..|..:|.:.:.:...:|.|..:.:|||:..::...|...|...
  Rat   322 EGDVTNSLQDMKLQSLFES--PDFSKITGKPVKLTQVEHRAAFEWNEEGAGTSSNPDLQPVRLTF 384

  Fly   389 PVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDPKT 424
            |::   :..|.||:||:.|..:.::||.|...||.:
  Rat   385 PLD---YHLNRPFIFVLRDTDTGALLFIGRILDPSS 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 87/398 (22%)
Serpinf1NP_808788.1 serpinF1_PEDF 41..413 CDD:381008 90/409 (22%)

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