DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinb1b

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_766640.1 Gene:Serpinb1b / 282663 MGIID:2445361 Length:382 Species:Mus musculus


Alignment Length:397 Identity:111/397 - (27%)
Similarity:192/397 - (48%) Gaps:52/397 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWAD---------SK 98
            |.:.:.:.:::|:|..|:||||:|...:|.:.:.|:.|.|..:|:|.||.|..:         :.
Mouse    11 FTLELFHTLKESSPTGNIFFSPFSISSSLAMVFLGAKGSTAAQLSKTLHFDSVEDIHSCFQSLTA 75

  Fly    99 EVVR--SAYILEKMNR---KERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQT 158
            ||.:  :::.|:..||   ::..:.:| ||.::.:..::.||              ..:||:..:
Mouse    76 EVSKLGASHTLKLANRLYGEKTYNFLP-EFLASTQKMYSADL--------------AAVDFQHAS 125

  Fly   159 EESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPS 223
            |::||:||.|:..||..:|..:|:...:...|:|||.||.|.||.|..||.|.:|:..||..:..
Mouse   126 EDARKEINQWVKGQTEGKIPELLAKGVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKK 190

  Fly   224 NYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILP---PFNS 285
            :...|.||.||..|.......|:..||::||               :..::|||::||   ...|
Mouse   191 DTKTVKMMYQKKKFPFGYISDLKCKVLEMPY---------------QGGELSMVILLPEDIEDES 240

  Fly   286 NSLEDVLSRLNADSLDDSLKQAMPREIE--VSLPKFEFEQRLELNPILAKMGVSKMFDESVATFD 348
            ..|:.:..:|....|.:..|....|.|:  |.||:|:.|:...||..|..:||..:|....|...
Mouse   241 TGLKKIEEQLTLGKLHEWTKHENLRNIDVHVKLPRFKMEESYILNSNLCCLGVQDLFSSGKADLS 305

  Fly   349 DLT-SETISIGDSKHVAKIKVDEEGSTAAAAT--VLFTYRSARPVEPAKFECNHPFLFVIYDRTS 410
            .:: |..:.:....|.:.:.|:|:|:.|||||  ::.......|.....|..:|||||.|....:
Mouse   306 GMSGSRDLFVSKIVHKSFVDVNEQGTEAAAATGGIIQVLCEKMPTPQEVFTVDHPFLFFIRHNPT 370

  Fly   411 RSILFTG 417
            .:::|.|
Mouse   371 ANMIFFG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 111/397 (28%)
Serpinb1bNP_766640.1 serpinB1_LEI 1..382 CDD:381028 111/397 (28%)
CARD-binding motif (CBM). /evidence=ECO:0000250|UniProtKB:P30740 352..382 9/26 (35%)

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