DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpina3k

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:451 Identity:126/451 - (27%)
Similarity:202/451 - (44%) Gaps:66/451 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLMAVLPAIALAGLCGV-----------------EPDAGLLDQRLNLYKGQQNFAVSMLNVIRQ 53
            ::.:..:..|.:||:|..                 ..|.|..|..|.|.....:||.|:...:..
Mouse     1 MAFIVAMGMILMAGICPAVLCFPDGTKEMDIVFHEHQDNGTQDDSLTLASVNTDFAFSLYKKLAL 65

  Fly    54 STPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEV-VRSAY--ILEKMNRKER 115
            ...::|:.|||.|...||.|...|:.|.|.:|:.:.|..:..::.|. :...:  :|:.:::.|.
Mouse    66 KNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQGFGNLLQSLSQPED 130

  Fly   116 QSKMPLEFSSADRIFFANDLHVT----ECARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQ 176
            |.::.:    .:.:|...||.:.    |..|.....|....||:..| |::..|||:::.||...
Mouse   131 QDQINI----GNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPT-EAKNLINDYVSNQTQGM 190

  Fly   177 IRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNV 241
            |:.::|  |:...|.:||.|..|.||:|...|..:.|....||........|.||:.|   ||..
Mouse   191 IKKLIS--ELDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMK---LLTA 250

  Fly   242 ----DEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLNADSLDD 302
                ||:|...||:|.|                ..:.|.:||||  :...::.|.:.|..::|..
Mouse   251 RHFRDEELSCSVLELKY----------------TGNASALLILP--DQGRMQQVEASLQPETLRK 297

  Fly   303 SLKQAMPREI-EVSLPKFEF--EQRLELNPILAKMGVSKMFDESVATFDDLTSETISIGDSKHVA 364
            ..|.....:| |::||||..  :.||| ..:|.:||:.::|.|.........::.:|:....|.|
Mouse   298 WRKTLFSSQIEELNLPKFSIASDYRLE-EDVLPEMGIKEVFTEQADLSGITEAKKLSVSQVVHKA 361

  Fly   365 KIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFEC-NHPFLFVIYDRTSRSILFTGIYRDPK 423
            .:.|.|.|:.||||| |:...|.|  |.||  .| |.|||.|||..:::||||.....:||
Mouse   362 VLDVAETGTEAAAATGVIGGIRKA--VLPA--VCFNRPFLIVIYHTSAQSILFMAKVNNPK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 116/401 (29%)
Serpina3kNP_035588.2 serpinA3_A1AC 38..418 CDD:381019 120/412 (29%)

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