DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpini2

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:415 Identity:114/415 - (27%)
Similarity:194/415 - (46%) Gaps:56/415 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDW 94
            :||:      ...|||.:...|..|..| ||.|||..|...|.:...|:.|..::::.:.|.:..
  Rat    22 MDQK------NAEFAVDLYKAISLSNKN-NVIFSPLGTTVLLGMVQLGAKGKAQQQIMQTLRMQK 79

  Fly    95 ADSKE---VVRSAYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQ----I 152
            ..:.|   |::|  :...:::|    |....|:.|..::......|.|...:...|..|.    :
  Rat    80 TSTGEEFSVLKS--LFSAISKK----KQEFTFNLASALYLQEGFIVKESYLHSNKEFFQSATKLV 138

  Fly   153 DFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMP 217
            || ...:.|.:.|:.|:..:|..:|:||.|.::..|.|||||.||.|.||.|..:|:.|.|....
  Rat   139 DF-LDAKTSAQAISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTD 202

  Fly   218 FYTSPSNYSLVSMMQ-----QKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMV 277
            |.....:...:.||:     :.|.|   .:..:...||:|||:.               .:.|:|
  Rat   203 FSKKDGSTVKIPMMKALLRAKYGYF---SESSMTYQVLELPYKA---------------DEFSLV 249

  Fly   278 LILPPFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDE 342
            ::||..:.| :|:|..::.|..:.....:....|:|||||:|:.||:|:....|..:.|:::|..
  Rat   250 ILLPTEDVN-IEEVEKQVTARHVQKWFSELHEEEVEVSLPRFKIEQKLDFKEALFSLNVTEIFSG 313

  Fly   343 SVATFDDLTSETIS--IGDSKHVAKI--KVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLF 403
            ..    ||:..|.|  :..|:.:.|:  :::|:||.|||:|.: ...:...:...:|..||||||
  Rat   314 GC----DLSGITDSSELYVSRAMQKVFFEINEDGSEAAASTGI-NIPAIMSLTQTQFLANHPFLF 373

  Fly   404 VIYDRTSRSILFTGIYRDP--KTIK 426
            ::....:.||||.|...||  .|:|
  Rat   374 IMKHIQTESILFMGKVTDPDIHTVK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 108/395 (27%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 114/414 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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