DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinb5

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_476449.2 Gene:Serpinb5 / 116589 RGDID:69342 Length:375 Species:Rattus norvegicus


Alignment Length:408 Identity:108/408 - (26%)
Similarity:203/408 - (49%) Gaps:71/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEV------- 100
            |||.:...:.:..|..|:.|||.....:|.||..|:.|||..|:.:|||.:  :.|:|       
  Rat    11 FAVELFKQLCEKEPAGNILFSPICLSTSLSLAQVGAKGDTANEIGQVLHFE--NVKDVPFGFQTI 73

  Fly   101 ------VRSAYILEKMNRK--ERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQ 157
                  :.|.|.|:.:.|.  ::...:..||.|:.:..:||              |::.:|||.:
  Rat    74 TSDVNKLSSFYSLKLIKRLYIDKSLNLSTEFISSTKRPYAN--------------ELETVDFKDK 124

  Fly   158 TEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSP 222
            .||::.|||..|.:.|.....::|..:.|:.:|::::.||||..|:|:.:|...:|...||..:.
  Rat   125 LEETKGQINSSIKELTDGHFEDILPENSISDQTKILVVNAAYFVGKWMKKFPESETKECPFRINK 189

  Fly   223 SNYSLVSMMQQKGTFLL-NVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILP---PF 283
            ::...|.||..:.||.| |:|: :...:::||:               :|..:||:::||   ..
  Rat   190 TDTKPVQMMNLEATFCLGNIDD-INCKIIELPF---------------QNKHLSMLIVLPKDVED 238

  Fly   284 NSNSLEDVLSRLNADSLDDSLKQAMP-----REIEVSLPKFEFEQRLELNPILAKMGVSKMFDES 343
            .|..||.:..:||.::|   |:...|     .::::|||||:.|:.::....|..:|:..:|:||
  Rat   239 ESTGLEKIEKQLNPETL---LQWTNPSTMANAKVKLSLPKFKVEKMIDPKASLESLGLKSLFNES 300

  Fly   344 VATFDDLTSET--ISIGDSKHVAKIKVDEEG--STAAAATVLFTYRSARPVEPAKFECNHPFLFV 404
            .:.|..: |||  :|:.:..|...:::.|:|  |.....:.:..::.       :|:.:|||||:
  Rat   301 TSDFSGM-SETKGVSVSNVIHRVCLEITEDGGDSIEVPGSRILQHKD-------EFKADHPFLFI 357

  Fly   405 IYDRTSRSILFTGIYRDP 422
            :....:|:|:|.|.:..|
  Rat   358 VRHNKTRNIVFLGKFSSP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 107/403 (27%)
Serpinb5NP_476449.2 serpinB5_maspin 1..375 CDD:381013 107/406 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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