DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinb5

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_476449.2 Gene:Serpinb5 / 116589 RGDID:69342 Length:375 Species:Rattus norvegicus


Alignment Length:408 Identity:108/408 - (26%)
Similarity:203/408 - (49%) Gaps:71/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEV------- 100
            |||.:...:.:..|..|:.|||.....:|.||..|:.|||..|:.:|||.:  :.|:|       
  Rat    11 FAVELFKQLCEKEPAGNILFSPICLSTSLSLAQVGAKGDTANEIGQVLHFE--NVKDVPFGFQTI 73

  Fly   101 ------VRSAYILEKMNRK--ERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQ 157
                  :.|.|.|:.:.|.  ::...:..||.|:.:..:||              |::.:|||.:
  Rat    74 TSDVNKLSSFYSLKLIKRLYIDKSLNLSTEFISSTKRPYAN--------------ELETVDFKDK 124

  Fly   158 TEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSP 222
            .||::.|||..|.:.|.....::|..:.|:.:|::::.||||..|:|:.:|...:|...||..:.
  Rat   125 LEETKGQINSSIKELTDGHFEDILPENSISDQTKILVVNAAYFVGKWMKKFPESETKECPFRINK 189

  Fly   223 SNYSLVSMMQQKGTFLL-NVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILP---PF 283
            ::...|.||..:.||.| |:|: :...:::||:               :|..:||:::||   ..
  Rat   190 TDTKPVQMMNLEATFCLGNIDD-INCKIIELPF---------------QNKHLSMLIVLPKDVED 238

  Fly   284 NSNSLEDVLSRLNADSLDDSLKQAMP-----REIEVSLPKFEFEQRLELNPILAKMGVSKMFDES 343
            .|..||.:..:||.::|   |:...|     .::::|||||:.|:.::....|..:|:..:|:||
  Rat   239 ESTGLEKIEKQLNPETL---LQWTNPSTMANAKVKLSLPKFKVEKMIDPKASLESLGLKSLFNES 300

  Fly   344 VATFDDLTSET--ISIGDSKHVAKIKVDEEG--STAAAATVLFTYRSARPVEPAKFECNHPFLFV 404
            .:.|..: |||  :|:.:..|...:::.|:|  |.....:.:..::.       :|:.:|||||:
  Rat   301 TSDFSGM-SETKGVSVSNVIHRVCLEITEDGGDSIEVPGSRILQHKD-------EFKADHPFLFI 357

  Fly   405 IYDRTSRSILFTGIYRDP 422
            :....:|:|:|.|.:..|
  Rat   358 VRHNKTRNIVFLGKFSSP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 107/406 (26%)
Serpinb5NP_476449.2 serpinB5_maspin 1..375 CDD:381013 107/406 (26%)

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