DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpini1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:434 Identity:120/434 - (27%)
Similarity:201/434 - (46%) Gaps:51/434 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MAVLPAIALAGLCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLL 73
            ||.|..::|..|..:...|...|:.:      ..::|::.|.:|.:..:||:.|||.|...|:.:
  Rat     1 MAYLGLLSLVALQSLVTGAAFPDETI------AEWSVNVYNHLRATGEDENILFSPLSIALAMGV 59

  Fly    74 AYFGSSGDTEKELAKVLHLDWADSKEVVRSAYILEKM-NRKERQSKMPLEFSSADRIFFANDLHV 137
            ...|:.|.|.||:...:..:...|.|..........| :.:|.|..|.:    |:.:|..|..|:
  Rat    60 MELGAQGSTLKEIRHSMGYESLKSGEEFSFLRDFSSMVSAEEGQYVMKI----ANSLFVQNGFHI 120

  Fly   138 TE----CARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAA 198
            .|    ..:.....||..:|| |:.......||.|:...|:..:::::|..:....|.|.|.||.
  Rat   121 NEEFLQMMKMYFNAEVNHVDF-SENVAVANYINKWVENYTNSLLKDLVSPGDFDAVTHLALINAV 184

  Fly   199 YLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLN--VDEQLRA----HVLQLPYRTV 257
            |.||.|.|||:.|.|....|.....:...:.||.|:|.|...  .|....|    .||::||   
  Rat   185 YFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPY--- 246

  Fly   258 FESQEKEDSSPDENSDISMVLILP----PFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPK 318
                        |..:|||:|:|.    |.  .:||.:|.....:...:|:|:   :::||.||:
  Rat   247 ------------EGDEISMMLVLSRQEVPL--ATLEPLLKPQLIEEWANSVKK---QKVEVYLPR 294

  Fly   319 FEFEQRLELNPILAKMGVSKMF--DESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAAATVL 381
            |..||.::|..||..:||:::|  |.::....|  .:.:.:..:.|.:.|:|:||||.||.|:.:
  Rat   295 FTVEQEIDLKDILKALGVTEIFIKDANLTAMSD--KKELFLSKAVHKSFIEVNEEGSEAAVASGM 357

  Fly   382 FTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDPKTI 425
            ........:.| :...:|||||:|.:|.:.:|||.|....|:|:
  Rat   358 IAISRMAVLFP-QVIVDHPFLFLIKNRKTGTILFMGRVMHPETM 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 111/396 (28%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 114/412 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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