DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and LOC110439158

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:425 Identity:109/425 - (25%)
Similarity:195/425 - (45%) Gaps:57/425 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LCGVE------PDAGLLDQRLNLYKGQQNFAVSMLNVIRQST--PNENVFFSPYSTYHALLLAYF 76
            :||.:      |.:..|...:|:   ..:||..:...:.:|.  .::|:||||::...||.....
Zfish    17 VCGNQETLQQPPISAKLPSLINI---NNDFAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTL 78

  Fly    77 GSSGDTEKELAKVLHLDWA-DSKEVVRSAY--ILEKMNRKERQSKMPLEFSSADRIFFANDLHVT 138
            |:.|||:::|...:..:.| .|.|.:...:  :||.:..:   :.:.::..:|   .:|:|... 
Zfish    79 GAGGDTKQQLLSGIGYNSAIFSTEEMHQLFHSLLEDIGNR---TGVDIDIGTA---LYASDRFK- 136

  Fly   139 ECARNRLAEEVQQ--------IDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLA 195
              ..::..|::::        :||:  .:|:..|||.::.::||.:|..  :.|::...|.:.|.
Zfish   137 --PHSKFLEDMKEFYHTDGFTVDFR--VKETVDQINKYVEEKTHGKINQ--AVDDLEKDTLMFLL 195

  Fly   196 NAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFES 260
            ...|.||:|...|..|||....|:........|.||.|.....:..|.:|...||.|.|      
Zfish   196 TYIYFKGKWDKPFNPEKTCESTFHIDDKTTVPVQMMHQYEYLKVYYDAELSIKVLCLDY------ 254

  Fly   261 QEKEDSSPDENSDISMVLILPP--FNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQ 323
                      |...||.|.:|.  ....::||:...::...::...:.|..|::::.:||...:.
Zfish   255 ----------NDSFSMFLAVPDVHMGRKTIEDLEMTISRQHIEKWKRSAFERKVDIYVPKLSLKT 309

  Fly   324 RLELNPILAKMGVSKMFDESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAA-ATVLFTYRSA 387
            ...||.||..||::.||.:. |.|..::.|.|.|....|.|.:.:||:|:|||| .||.|...|.
Zfish   310 SYFLNDILKGMGMADMFSDK-ADFTGVSEEKIFISKVVHKATLDIDEKGTTAAAVTTVQFRQLSY 373

  Fly   388 RPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDP 422
            .|:....|:  .||:..|.|:|:.:|||.|...:|
Zfish   374 SPLSTLSFD--RPFMIFITDQTNDNILFFGKVVNP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 103/395 (26%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 103/394 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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