DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpine3

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_031752090.1 Gene:serpine3 / 100497951 XenbaseID:XB-GENE-6044687 Length:450 Species:Xenopus tropicalis


Alignment Length:449 Identity:98/449 - (21%)
Similarity:169/449 - (37%) Gaps:89/449 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWAD 96
            :.|||:     |||.:...:.......|:..||.|...:|.|..||:.|:|..::..:|..:..|
 Frog    31 RELNLH-----FAVRLYQTLVNMENRTNLVVSPSSVASSLGLLQFGAQGNTFAQMESILGYNVHD 90

  Fly    97 SKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFFANDL----HVTECARNRLAEEVQQIDFKSQ 157
                |.....:|.|......|........|..:|.....    ...:.|.......:|..:| |:
 Frog    91 ----VTVQDFMETMFSGLANSSQGTAIHLACALFIQTGTTFSPRFIQYAALWANSSLQLANF-SE 150

  Fly   158 TEESRKQINDWIAKQT----------------HDQ------------------------------ 176
            ...:..|||.|::..|                |:.                              
 Frog   151 PGMTATQINQWVSSNTGGEYPQYLVPISCPYAHEAHYILLYLARLRVYKLYLQLIIICQMALTCG 215

  Fly   177 IRNMLSADEITP-RTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQK-----G 235
            |:.::..||..| ..::.|.:..|.|..|.::|....|..:||.::..:...|.||.|.     |
 Frog   216 IQPLVPCDEFGPVFPQIALVSTMYFKSTWKTKFSFTDTQTLPFISTDGSTIKVPMMHQTADVNYG 280

  Fly   236 TFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLNADSL 300
            .|  ......|..|::|||               ..:.:||.::.|...:..|..:.:.|.:.|:
 Frog   281 QF--ETPSLKRFTVVELPY---------------IGNTVSMFVVRPSDRNTPLSCIEANLTSKSM 328

  Fly   301 DDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTSET-ISIGDSKHVA 364
            ..........:::|.||:|..:....|..:|..:|.:.:||...|.|..::.:: :.|..:.|.|
 Frog   329 AQWANSMKRMKMDVFLPRFRLQSHSNLRNVLPALGATDLFDPWKANFKGISEQSGLYISQAIHKA 393

  Fly   365 KIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDP 422
            :|:|.|.|:.|:..| ::...||..||    |:.:.||.|.:...:|.||||.|...:|
 Frog   394 EIEVAEGGTRASGVTAMVLLKRSRMPV----FKADRPFFFFLRQASSGSILFIGRVTNP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 94/437 (22%)
serpine3XP_031752090.1 serpinE3 22..448 CDD:381040 97/447 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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