DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpinf2

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_002937193.2 Gene:serpinf2 / 100170598 XenbaseID:XB-GENE-877015 Length:594 Species:Xenopus tropicalis


Alignment Length:402 Identity:96/402 - (23%)
Similarity:171/402 - (42%) Gaps:77/402 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWAD----------- 96
            |::.:|..|...:...:|..||:|....||....|:..:.:.:|.:.||::...           
 Frog   226 FSIDLLKEIDPESKKPSVVMSPFSIALGLLQLSLGAGKEMQNKLMETLHVESLHCLHNKLKTVRK 290

  Fly    97 --SKEVVRSA---YILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKS 156
              ||.::|:|   |:.:....|:...|      |:::.:.:..||:....:..|           
 Frog   291 ELSKSILRTATRIYLKKGFQIKDSFLK------SSEKWYGSKPLHLGGSKKKNL----------- 338

  Fly   157 QTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTS 221
                  :.||.|:...|..||.:.||  ::.....|:|.||.:.||.|.:.|....|....||.:
 Frog   339 ------ESINKWVKDITEGQIPHFLS--DLPQDVLLILLNAMHFKGVWKNTFDPSLTSEDSFYIN 395

  Fly   222 PSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVF-ESQEKEDSSPDENSDISMVLILPPFNS 285
            ......|.||..:                :.|:...| ||.|.:.:......::|.|:::|..::
 Frog   396 DDMSVPVEMMSAQ----------------KYPFSWFFLESIESQVAKFQFKGNMSFVVLMPYSST 444

  Fly   286 NSLEDVLSRLNADSLDDSLKQAMPRE--IEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFD 348
            .:    ||:|.|:.....|....|||  ..:.:||...:.:|||...|..:|:.::|     |..
 Frog   445 WN----LSKLLANFSQSDLYSRFPREKNTNLKMPKLNLDYKLELRNPLTNLGLGQLF-----TNP 500

  Fly   349 DL---TSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTS 410
            ||   |:|.:.:...:|.:.::::|||..|:|.|.:.|.||     .:.:..|.||||.:::.|.
 Frog   501 DLSGITNEALVVSSIQHQSSLELNEEGVEASAVTAVITSRS-----HSVYRINRPFLFFLFEDTM 560

  Fly   411 RSILFTGIYRDP 422
            ...||.|..|:|
 Frog   561 GIPLFMGHVRNP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 95/400 (24%)
serpinf2XP_002937193.2 PRK12495 <18..>140 CDD:183558
PHA03169 <89..>215 CDD:223003
serpinF2_A2AP 212..574 CDD:381009 96/402 (24%)
Blue background indicates that the domain is not in the aligned region.

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