DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpine1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001108031.1 Gene:serpine1 / 100136840 ZFINID:ZDB-GENE-070912-60 Length:384 Species:Danio rerio


Alignment Length:435 Identity:117/435 - (26%)
Similarity:195/435 - (44%) Gaps:75/435 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SISLMAVLPAIALAGLCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYH 69
            |:|::.:. |:..:.||.:..|.            |.:|.:.:.....||.|:.|:..|||....
Zfish     3 SLSVLLIF-ALCASSLCNLIQDK------------QTDFGLQVFAEAVQSAPDRNLALSPYGIAS 54

  Fly    70 ALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFFAND 134
            .|.:|..|:.|.|.|.||.             :..|.|::....:.|..:..:.:|.|.:..|:.
Zfish    55 VLGMAQMGAYGATLKLLAS-------------KMGYSLQERGMPKLQRLLQRDLASEDGVEVASG 106

  Fly   135 LHV------TECARNRLAEEVQ----QIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPR 189
            :.|      .:..|..|::..|    |||| ||.|.:|:.||.|.:..|...|...|.:..::..
Zfish   107 VMVDRKIILEKVFRRSLSKAFQSVPHQIDF-SQPEMARQVINSWTSDHTDGMISEFLPSGVLSEL 170

  Fly   190 TRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRA-----HV 249
            ||||..||.:..|.|.:.|....|....|:|  .|.|.||:.....|...|..|.:..     .|
Zfish   171 TRLVFLNALHFHGVWKTPFDPRNTREQLFHT--VNGSAVSVPMMTTTQKFNYGEFVSKDGVDYDV 233

  Fly   250 LQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDV-LSRLNADSLDDSL---KQAMPR 310
            :::||               |...|||:|: .||.    :|| ||.||.:.....:   :|.| |
Zfish   234 IEMPY---------------EGESISMLLV-TPFE----KDVPLSALNKELSSSRIHQWRQEM-R 277

  Fly   311 EI--EVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTS-ETISIGDSKHVAKIKVDEEG 372
            :|  ::|:|:|..:..::|...|::||:..:|.:|.|.|..:|: |.:.:.......|::|:|||
Zfish   278 KISKQLSIPRFSMDTEIDLKSTLSRMGLGDIFSQSRADFSRITTEEPLCVSKVLQRVKLEVNEEG 342

  Fly   373 STAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTG 417
            :..::||....| |...||  :...:.||.|:|..:.:.::||:|
Zfish   343 TKGSSATAAVIY-SRMAVE--EITLDRPFFFLIQHKPTGALLFSG 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 111/401 (28%)
serpine1NP_001108031.1 SERPIN 26..384 CDD:294093 109/397 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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