DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpine1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_002941247.2 Gene:serpine1 / 100127732 XenbaseID:XB-GENE-969639 Length:403 Species:Xenopus tropicalis


Alignment Length:395 Identity:101/395 - (25%)
Similarity:184/395 - (46%) Gaps:39/395 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVL---HLDWADSKEVVRS 103
            :|.:.:...:......:|:.||||....||.:...|::|.|..::.|.|   |.:||.:..:.: 
 Frog    34 SFGLRLFQEVLADQWGKNLGFSPYGVTSALSVLQSGAAGTTLDQIRKALNYGHKEWAVALALNK- 97

  Fly   104 AYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLA----EEVQQIDFKSQTEESRKQ 164
              :.|:::.:::.::.|.....||.:|...||.:|.....|..    ..:.|::| :...:::..
 Frog    98 --LREQISGQQKSAEDPKPVHIADGLFVQRDLSLTPGFLQRFQATFHRHLSQVNF-TDVAQAKDI 159

  Fly   165 INDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVS 229
            ||.|:..:|...|::::.::.|.|.|||||.:|.:..|:|...|..:.|...|||.|..::..|.
 Frog   160 INQWVENKTDGMIKDLVGSNNIPPLTRLVLLSAVHFSGKWTVPFLEKATHQRPFYRSDGSHVQVQ 224

  Fly   230 MMQQKGTFLLNVDEQLRA-----HVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLE 289
            ||...|.:  |..|....     .|::|||               |..::|| ||..|:..|...
 Frog   225 MMANTGKY--NCSEFTTPDGDFYDVIELPY---------------EGEELSM-LIAAPYEKNVPL 271

  Fly   290 DVLSRLNADSLDDSLKQAMPREIE-VSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTSE 353
            ..::.:....|....|..|.:... :.||||.....::|...|.::|::.||.:..|.|..|:||
 Frog   272 SAITNILTPELIAQWKAQMKKVTRLLVLPKFSLLSEVDLKKPLERLGITDMFTQETADFSRLSSE 336

  Fly   354 -TISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTG 417
             .:.:.::....|::|.|:|:.|:|||.........|:|..   .:|||||::....:.::||.|
 Frog   337 KPLYVSEAFQKIKVEVTEKGTRASAATAAILLARMAPLEVI---MDHPFLFMVRHNPTGTLLFVG 398

  Fly   418 IYRDP 422
            ...:|
 Frog   399 QVMEP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 100/390 (26%)
serpine1XP_002941247.2 SERPIN 22..403 CDD:294093 100/393 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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