DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb6c

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001369781.1 Gene:Serpinb6c / 97848 MGIID:2145481 Length:379 Species:Mus musculus


Alignment Length:380 Identity:122/380 - (32%)
Similarity:212/380 - (55%) Gaps:18/380 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFDFNLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF- 64
            |.|..||   ..|.|...|.::|.....| ||..||.||.:.:.:...|::|.||.:|.:||.. 
Mouse     1 MMDPLLE---ANATFALNLLKILGEDRSK-NVFLSPISISSALVMVLLGAKGTTAIQITQALSLG 61

  Fly    65 --VSNFPPEVAQTFQFVLEKYRNSNL---LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINF 124
              .|:...:|.|.||.:|.:...:..   |:.||:|:.::...:..:::.:..:.|.:|.|.::|
Mouse    62 KCSSSEDGDVHQGFQLLLSEVNKTGTQYSLKAANRLFGEKTFDILASFKDSCHKFYEAEMEELDF 126

  Fly   125 -ALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFW 188
             ...:.:.|.||.||..||:.||.||:|..:...||.|:|:||::|||.|..:|::|.|.|..|.
Mouse   127 KGATEQSRQHINTWVAKKTEDKIKELLSPGTIHSNTPLILVNAVYFKGKWEKQFNKEDTREMPFK 191

  Fly   189 VGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNL 253
            |.:.|:..:..|.||:.|...:.|::....|.:||..::|:|.::||.|...:..:.:::.....
Mouse   192 VSKNEEKPVQMMFQKSTFKMTYVEEISTKILLLPYVGNELNMIIMLPDEHVELSTVEKEITHEKF 256

  Fly   254 VDLA--DKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTD-QAEFSNLLESPEGVFVSKVL 315
            ::..  |::..|:|.|..|.||::.:.::.:.|.:||:|..|.: :|:||. :.|.:|:|:|.|:
Mouse   257 IEWTRLDRMKGEKVEVFLPWFKLEENYDMKDVLCKLGMTDAFEEGRADFSG-ISSKQGLFLSNVI 320

  Fly   316 HKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKK--NILFAG 368
            ||:.:||||||:||.|||.:::.....:.|. |..:|||::.|.:.|  .|||.|
Mouse   321 HKSVVEVNEEGSEATAATTIVLKGSSRSTPC-FCVNRPFIFFIQHIKTNEILFLG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 118/368 (32%)
Serpinb6cNP_001369781.1 serpin 2..379 CDD:422956 121/379 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.730

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