DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and AT1G63280

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_176517.1 Gene:AT1G63280 / 842634 AraportID:AT1G63280 Length:120 Species:Arabidopsis thaliana


Alignment Length:112 Identity:35/112 - (31%)
Similarity:52/112 - (46%) Gaps:14/112 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 QAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVK 196
            |.:|.|.:..|.|.|.:|:...|....|..|..|||:|||:|.:||.:..|:::.|..|:|..|.
plant    14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKEVHVP 78

  Fly   197 I--NYMNQKAKFNYGFFEDLGCTALEMPYQDS------DLSMFVLLP 235
            .  :|.:|......||      ..|.:|||..      ..|::..||
plant    79 FMRSYESQYIMACDGF------KVLGLPYQQGLDDTKRKFSIYFYLP 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 35/112 (31%)
AT1G63280NP_176517.1 serpin <5..>120 CDD:422956 35/112 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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