DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and AT1G62170

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001185292.1 Gene:AT1G62170 / 842513 AraportID:AT1G62170 Length:466 Species:Arabidopsis thaliana


Alignment Length:401 Identity:90/401 - (22%)
Similarity:167/401 - (41%) Gaps:77/401 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAK-ALHFV-SNFPPEVAQTFQFVLE--- 81
            ::|:.....|.||||.||...:.:..|.|.||..:|:.. .|.|: |:...|:...|:.:..   
plant    82 VISSVAKNSNFVFSPASINAALTMVAASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASVVL 146

  Fly    82 ---KYRNSNLLRVANKLYVQEGKQLKPAYQSAIKE---------QYHSEAESIN----------- 123
               ..:....:.|.|.:::.:...:.|..:...|.         .:.|:...:|           
plant   147 VDGSKKGGPKIAVVNGMWMDQSLSVNPLSKDLFKNFFSAAFAQVDFRSKCNVLNKLGLAVSLLES 211

  Fly   124 -----------FALNDAAAQA---INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWA 174
                       |||..:|.:.   :|||.::.|.|.|.:|:...|.:..|..|..:||:|||:|.
plant   212 IFHISTLFDFKFALIRSAEEVRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTWE 276

  Fly   175 HKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQ------DSDLSMFVL 233
            .|:|:..|:...|::.....|.:.:|:...|.....::  |...|.:||:      :.:.:|::.
plant   277 EKYSKSMTKCKPFYLLNGTSVSVPFMSSFEKQYIAAYD--GFKVLRLPYRQGRDNTNRNFAMYIY 339

  Fly   234 LPQERTGIYALAEKL-KTVNLVDLAD-KLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQ 296
            ||.::..:..|.|:: .|...:|..: :..|:....:.||||:::..|.:.......:...|   
plant   340 LPDKKGELDDLLERMTSTPGFLDSHNPERRVKVGKFRIPKFKIEFGFEASSAFSDFELDVSF--- 401

  Fly   297 AEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGM--IMMTRMMTFPLQFQADRPFLYVIW 359
                              ..|..||::|:||||...|..  ..:...:..|:.|.||.|||::|.
plant   402 ------------------YQKTLIEIDEKGTEAVTFTAFRSAYLGCALVKPIDFVADHPFLFLIR 448

  Fly   360 NKK--NILFAG 368
            .::  .:||||
plant   449 EEQTGTVLFAG 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 90/401 (22%)
AT1G62170NP_001185292.1 SERPIN 69..464 CDD:294093 90/401 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

Return to query results.
Submit another query.