DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and SRP2

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:390 Identity:96/390 - (24%)
Similarity:163/390 - (41%) Gaps:87/390 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQFVLEK--Y 83
            :::||.....|.||||.||...:.:..|.:..:|....  .|.|:.:...|........|..  :
plant    48 KVISAVAKNSNCVFSPASINAVLTVTAANTDNKTLRSF--ILSFLKSSSTEETNAIFHELASVVF 110

  Fly    84 RNSN-----LLRVANKLYVQEGKQLKPAYQ---------SAIKEQYHSEAESINFALNDAAAQAI 134
            ::.:     .:...|.:::::.....|.::         |..|..:..:||.:..        .:
plant   111 KDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKAEEVRL--------DV 167

  Fly   135 NAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINY 199
            |.|.:..|...|.|::...|.:..|..:..|||:|||:|...|.:..|.:..|.:...:.|.:.:
plant   168 NTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPF 232

  Fly   200 MNQKAKFNYGFFEDL-GCTALEMPYQ------DSDLSMFVLLPQERTGIYALAEKLKTVN----- 252
            |....|   .|.|.. |...|.:||:      :.:.||::.||.::..:..|.|:: |.|     
plant   233 MRSYEK---QFIEAYDGFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLLERI-TSNPGFLD 293

  Fly   253 ------LVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFV 311
                  .||:.|        .:.||||:::..|         .:.:|.|              |.
plant   294 SHIPEYRVDVGD--------FRIPKFKIEFGFE---------ASSVFND--------------FE 327

  Fly   312 SKV-LH-KATIEVNEEGTEAAAATGMIMMTRMMTF----PLQFQADRPFLYVIWNKK--NILFAG 368
            ..| || ||.||::||||||||||.::::|....:    .:.|.||.|||::|...|  .:||||
plant   328 LNVSLHQKALIEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLLFAG 392

  Fly   369  368
            plant   393  392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 96/390 (25%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 96/390 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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