DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpina3a

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:379 Identity:108/379 - (28%)
Similarity:182/379 - (48%) Gaps:39/379 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE--VAQTFQ 77
            |...|::.|:.....:|:||||.||...:||...|::..|.:||.:.|.|.....||  :.|.|.
Mouse    56 FAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEADIHQNFG 120

  Fly    78 FVLE---KYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVN 139
            .:|:   :..|...:...|.|::.:..|:...::...:..|.:||.:.:|.|...|.:.||.:|.
Mouse   121 HLLQMLIQPENQVQINAGNALFIDKHLQILTEFKEKARALYKAEAFTADFQLPREATKLINDYVR 185

  Fly   140 AKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYM-NQK 203
            .:|||||.||||  ....||.:.|:|.|:|:|.|...|..|.|....|.:..:..|.:..| .::
Mouse   186 KQTQGKIKELVS--DLHRNTSMALVNFLNFQGFWNVTFDPEDTFLGNFTLDRKRTVNVPMMKTEE 248

  Fly   204 AKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNL----VDLADKLTVEE 264
            ...||...|::..|.:|:.|..:...:|:|..|.|  |..:.:.|:..:|    ..|..::..| 
Mouse   249 LTTNYFRDEEMQSTVMELNYIGNASFLFILPDQGR--IQHVEDSLQPQSLRKWRKSLRPRMLDE- 310

  Fly   265 VHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEA 329
              :..|||.:.....|.:.|.:|||.::|:.||:.|. :...:.:.||:::|:|.::|.|..|||
Mouse   311 --LSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSG-ITGAKNIRVSQMIHQAALDVTETHTEA 372

  Fly   330 AAATGMIMMTRMMTFPLQFQA----------DRPFLYVIWNK--KNILFAGAFV 371
                .:|.:.|     ..||:          ||.|||:|.:.  |:|...|..:
Mouse   373 ----DVITIAR-----YNFQSAKIKAKIVKVDREFLYLILDPMFKSISVMGKVI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 108/376 (29%)
Serpina3aNP_001161177.1 SERPIN 53..416 CDD:294093 108/376 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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