DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpine3

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_006252257.2 Gene:Serpine3 / 691375 RGDID:1585042 Length:413 Species:Rattus norvegicus


Alignment Length:375 Identity:100/375 - (26%)
Similarity:178/375 - (47%) Gaps:31/375 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FARGG------------ARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAK 60
            |:.||            ..|...|:|..:|.....|.|.||.|:...:.:....::|.|..::|:
  Rat    16 FSAGGGSPLSEGLWLLKTEFALHLYQSAAAETNGTNFVISPASVSLSLEILQFAARGNTGWQLAE 80

  Fly    61 ALHFVSNFPPEVAQTFQFVLEKYRNSNL---LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESI 122
            ||.:... .|.|.:....|.....||:.   :.:|..|::|.|..|.|.:...:....:|..|..
  Rat    81 ALGYTVQ-DPRVREFLHTVYITLHNSSQGIGMELACTLFMQTGTSLSPCFVEQVSRWANSSLELA 144

  Fly   123 NFA-LNDAAAQAINAWVNAKT-QGKITELVS-ADSFSDNTRLVLLNALHFKGSWAHKFSEERTEE 184
            :|: .|....:|........| :|..:.|.. |.:.|  |:|.:::.:.|:.||..:||....:.
  Rat   145 DFSEPNTTTMEASKGTTRPSTGEGPGSPLWGRAGALS--TQLSIVSTMTFQSSWQQRFSSVALQP 207

  Fly   185 DIFWVGEEEQVKINYMNQKAKFNYGFFEDLG---CTALEMPYQDSDLSMFVLLPQERTGIYALAE 246
            ..|.......:::..|:|.|:.:||.|:|..   ...||:.|.....|:.::|||::.......|
  Rat   208 LPFTCAHGLVLQVPAMHQVAEVSYGQFQDAAGHKVDVLELLYLGRVASLLLVLPQDKGTPLDHIE 272

  Fly   247 KLKTVNLVDL-ADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNL--LESPEG 308
            ...|..::.| ..:|....:.|..|:|::....:|...|:..|||.:| |..: :||  :...:|
  Rat   273 PHLTARVIHLWTTRLKRARMDVFLPRFRIQNQFDLKSILRSWGITDLF-DPLK-ANLKGISGRDG 335

  Fly   309 VFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVI 358
            .:||:|.|||.:|::||||::.|||.::::.|..| | .|:|||||::::
  Rat   336 FYVSEVTHKAKMELSEEGTKSCAATAVLLLRRSRT-P-AFKADRPFIFLL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 97/358 (27%)
Serpine3XP_006252257.2 serpin 20..400 CDD:422956 98/371 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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