DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and Serpina12

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_080811.1 Gene:Serpina12 / 68054 MGIID:1915304 Length:413 Species:Mus musculus


Alignment Length:367 Identity:97/367 - (26%)
Similarity:185/367 - (50%) Gaps:32/367 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF--VSNFP 69
            :.||....|..:|.|.|::...:.|:..||.||.|..::...|:|..|.:||.:..:|  :||: 
Mouse    47 QLARHNMEFGFKLLQRLASNSPQGNIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSNW- 110

  Fly    70 PEVAQTFQFVLEKYR---NSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAA 131
             :|...|.::|.|..   ....:.:.|.|::.:..:.:..:.:..|..|.::....||...:...
Mouse   111 -DVHAAFHYLLHKLNQETEDTKMNLGNALFMDQKLRPQQRFLNLAKNVYDADMVLTNFQDLENTQ 174

  Fly   132 QAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVK 196
            :.||.:::.||..:|..:|.  |....|.::|.|.::|:|.|.::|..::|:|:.|::.:.:.||
Mouse   175 KDINRYISQKTHSRIKNMVK--SIDPGTVMILTNYIYFRGRWQYEFDPKQTKEEEFFIEKGKTVK 237

  Fly   197 INYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFV--------LLPQE-RTGIYALAEKLKTVN 252
            :..|.|:..::..:...|.||.||:||:.:..:.||        ||.|. :..|:|..:.|.:..
Mouse   238 VPMMFQRGLYDMAYDSQLSCTILEIPYRGNITATFVLPDNGKLKLLEQGLQADIFAKWKSLLSKR 302

  Fly   253 LVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHK 317
            :||           |..||.::..:..:.:.|.:|||:|:|.:..:.:. :.|...:.|.:.:||
Mouse   303 VVD-----------VWVPKLRISSTYNMKKVLSRLGISKIFEENGDLTR-ISSHRSLKVGEAVHK 355

  Fly   318 ATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIW 359
            |.::::|:|.|.||.:|  ..|..|..|...:.|||||.:|:
Mouse   356 AELKMDEKGMEGAAGSG--AQTLPMETPRHMKLDRPFLMMIY 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 95/361 (26%)
Serpina12NP_080811.1 alpha-1-antitrypsin_like 51..408 CDD:239011 95/363 (26%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.