DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and Serpinb11

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_080143.1 Gene:Serpinb11 / 66957 MGIID:1914207 Length:388 Species:Mus musculus


Alignment Length:380 Identity:120/380 - (31%)
Similarity:207/380 - (54%) Gaps:29/380 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQT---- 75
            |..::|:.||:..:.||:.|||.:....:::...|::|::|:::.|.||:.|......|:|    
Mouse    11 FCLDVFKELSSNNVGENIFFSPLTTFYALSMLLLGTRGKSAEQMEKVLHYDSFSGVLKAKTKNSS 75

  Fly    76 -----------FQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALN-D 128
                       |:.::......|.|.|||::|..........|....::.|.::.::::|.|: :
Mouse    76 ECSQVGVMHPDFRALISHINQQNSLSVANRIYGTRSISFHKQYVRCCEKLYQAKLQTVDFELSTE 140

  Fly   129 AAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEE 193
            ...::|||||..||.||||.|.:..:...::.:||::|::|||.|.:||.:..|.:..|.:|..:
Mouse   141 ETRKSINAWVKNKTNGKITNLFAKGTIDPSSVMVLVSAIYFKGQWQNKFQKRETVKAPFHMGVGK 205

  Fly   194 QVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLAD 258
            ...:|.|.|...|.....::.....||:||.::.|.|.:|||   .|..::::..|.:|:..|.:
Mouse   206 SAVVNMMYQTGTFKLAIIKEPEMQVLELPYANNKLRMIILLP---VGTASVSQIEKHLNVKMLRE 267

  Fly   259 -----KLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPE-GVFVSKVLH 316
                 .:...||.|..|||.:....:|...||.||:..:| ...|:.|.:  ||: |:::|||:|
Mouse   268 WTNPSNMVEREVDVHIPKFSLSVKYDLNTLLKSLGMRDIFNVANADLSGM--SPDKGLYLSKVVH 330

  Fly   317 KATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKK-NILFAGAF 370
            |:.::|||||||||||||..:..:.:...:||.|:.|||:.||::. ||||||.|
Mouse   331 KSYVDVNEEGTEAAAATGESISVKRLPVTVQFTANCPFLFFIWDESGNILFAGKF 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 119/378 (31%)
Serpinb11NP_080143.1 SERPIN 4..388 CDD:294093 120/380 (32%)
RCL. /evidence=ECO:0000250 338..362 11/23 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2402
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 232 1.000 Inparanoid score I3415
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

Return to query results.
Submit another query.