DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb2

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_067728.1 Gene:Serpinb2 / 60325 RGDID:621823 Length:416 Species:Rattus norvegicus


Alignment Length:414 Identity:129/414 - (31%)
Similarity:203/414 - (49%) Gaps:53/414 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF------- 64
            |.:.....|...|.:.:......:|:..||:||.:.:|:.|.|:|..|.:::||.|:|       
  Rat     3 ELSMANTMFALNLLKQIEQSNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSYD 67

  Fly    65 -------------------VSNFPPEVAQ------------TFQFVLEKYR-NSNLLRVANKLYV 97
                               ..|:|..:.|            :....:...| ...||..||||:.
  Rat    68 LTPGNPENFHGCDFAQHIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDYLLESANKLFG 132

  Fly    98 QEGKQLKPAYQSAIKEQYHSEAESINF--ALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTR 160
            ::..:.|..|....|:.|.:|.|:::|  ..|: |.:.||:||..:|:|:|..|:...|..::|:
  Rat   133 EKSARFKEEYIQRCKKYYSTEPEAVDFLECANE-ARKKINSWVKTQTKGEIPNLLPEGSVDEDTK 196

  Fly   161 LVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQD 225
            :||:|.::|||.|...|.:.......|.|...|...:..|..:.|.|.|:.:||....||:|| .
  Rat   197 MVLVNTIYFKGRWKTPFQKRLNGLYPFRVNLNESKPVQMMYLREKLNIGYIKDLKTQILELPY-I 260

  Fly   226 SDLSMFVLLPQE----RTGIYALAEKLKTVNLVDLADKLTVEE--VHVKFPKFKVDYSLELAEKL 284
            .::|||:|||.|    .||:..|..::...|......|.|::|  |.|..||||:..:.||...|
  Rat   261 GNISMFLLLPDEIEDSSTGLEMLEREINFDNFNKWISKETLDEDDVLVYIPKFKLAQNYELKPIL 325

  Fly   285 KQLGITKMFT-DQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQF 348
            :::|:...|. .:|:||.:.||.: :|:|:|.|:||::||||||.||..||.:|..|......||
  Rat   326 QRMGMEDAFNKGKADFSGMSESND-LFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRTGHGGPQF 389

  Fly   349 QADRPFLYVIWNK--KNILFAGAF 370
            .||.|||:.|.|.  :.|||.|.|
  Rat   390 VADHPFLFFIMNNITRTILFVGRF 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 127/406 (31%)
Serpinb2NP_067728.1 serpinB2_PAI-2 2..416 CDD:381029 129/414 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

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