DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and si:ch211-186e20.7

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_021329695.1 Gene:si:ch211-186e20.7 / 566630 ZFINID:ZDB-GENE-110407-6 Length:410 Species:Danio rerio


Alignment Length:365 Identity:114/365 - (31%)
Similarity:186/365 - (50%) Gaps:43/365 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSN--FPPEVAQTFQFVLEKYRNSN--LLR 90
            :|:.|||||:...::....|:.|:|..::...:.:.|.  ...|:.|.|..:||...|..  .:.
Zfish    60 KNIFFSPFSVSIALSELSLGAGGDTKQQLLSGIGYNSTTFSTEEMHQLFHSLLEDIGNRTGVDID 124

  Fly    91 VANKLYVQEGKQLKP--AYQSAIKEQYHSEAESINFALNDAAAQAINAWVNAKTQGKITELVSAD 153
            |...||..:  :.||  .:...:||.|||:..:::|.:.:...| ||.:...|||||..:.|  |
Zfish   125 VGTALYASD--RFKPHSKFLEDMKEFYHSDGFTVDFRVKETVDQ-INNYAKKKTQGKFNQAV--D 184

  Fly   154 SFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTA 218
            ...::|.:.||..::|||.|...|..|:|.|..|.:.::..|.:..|:|..:....:..:|....
Zfish   185 DLEEDTLMFLLTYIYFKGKWDKPFKPEKTRESTFHIDDKTTVPVQMMHQYERLKVFYDAELSTKV 249

  Fly   219 LEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVH--------------VKF 269
            |.:.|:|| .|||:.:|.         :|::..|:.||  ::||...|              :..
Zfish   250 LCLDYKDS-FSMFLAVPD---------DKMEHKNIKDL--EMTVSRQHFEKWRRSAFKKTVDIYV 302

  Fly   270 PKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATG 334
            ||..:..|..|.:.||.:|:..||:|:|.|:.:  |.|.:||||||||||::::|:||.|||.||
Zfish   303 PKLSLKTSYSLKDILKGMGMADMFSDKANFTGV--SEEKIFVSKVLHKATLDIDEQGTTAAAVTG 365

  Fly   335 MIMMTRMMTFPLQ-FQADRPFLYVIWNK--KNILFAGAFV 371
            :.|..|:.. ||. .:.:|||:..|.::  .||||.|..|
Zfish   366 VSMRVRLHN-PLSILKFNRPFMVFITDQTNDNILFFGKVV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 113/362 (31%)
si:ch211-186e20.7XP_021329695.1 alpha-1-antitrypsin_like 39..403 CDD:239011 113/362 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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