DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and serpina10a

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001038536.2 Gene:serpina10a / 565064 ZFINID:ZDB-GENE-041014-246 Length:391 Species:Danio rerio


Alignment Length:367 Identity:89/367 - (24%)
Similarity:179/367 - (48%) Gaps:10/367 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE 71
            |.|...|.|.:.|:..: |....:||..|.......:|...||:.|.|..|:.:.:...|.....
Zfish    28 ELAIKNADFATRLYSKI-ASSSDDNVAVSTLGATLALATLAAGAGGATQSELLQGIGVDSMVKDG 91

  Fly    72 VAQTFQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINA 136
            ..:..|.:|::.|.......|..|::::..:...::.:.:|:.|:::.:::|:|....|..:||.
Zfish    92 EQERIQNILQQLREDAAQIPATGLFIKQDVKADDSFSNQVKQYYNADVQNVNYANGQQAKGSIND 156

  Fly   137 WVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMN 201
            :|..:|..|:.::|  ::....:..:|::|..|.|.|...|:...|:||.|:|.:...|::..|.
Zfish   157 YVRGRTGEKVRDVV--ENVDPQSMAILISAAFFTGQWLQPFNATFTQEDRFYVNKYNIVQVPMML 219

  Fly   202 QKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVH 266
            :..|:...:........|::|.::. ::|.||||.|......:.|.:..........||...::.
Zfish   220 RSGKYYLAYDPTFKVGILKLPCENG-IAMLVLLPDEDVDYTYVDESMTGEVFRGWVAKLKKTKLE 283

  Fly   267 VKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAA 331
            ::.|:|.:..|..|:..|..||:.::|.:.|..:. :.|.||:.:|:|..|..::|:|.|...|.
Zfish   284 IQLPRFSLKQSNSLSVSLPSLGVKEIFGNTANLTG-ISSSEGLKLSEVEQKVAVDVDESGGSLAE 347

  Fly   332 ATGMIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAGAFV 371
            |:|.:.|..:   |.:...:|||::|::::  |.||:.|..|
Zfish   348 ASGNLFMNPL---PPRLTFNRPFIFVVYHEVTKCILYIGRVV 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 86/358 (24%)
serpina10aNP_001038536.2 Serpin 33..388 CDD:278507 87/362 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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