DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb3a

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:382 Identity:136/382 - (35%)
Similarity:215/382 - (56%) Gaps:24/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVS------ 66
            ||:...:||.||::.|...  ::|:.:||.||.|.:|:...|::|.|..:|.|.:.|..      
  Rat     4 FAKATTQFTLELYRQLRDS--EDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVIQFHETTKKTT 66

  Fly    67 ------NFPPEVAQTFQFVLEKYRNSN---LLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESI 122
                  :....|.:.||.::.:...||   .|..||.:|..:.......:...|||.|.:..||:
  Rat    67 EKSADCHDEESVHEQFQKLMTQLNKSNDAYDLNSANSIYGAKHFPFLQTFLEDIKEYYQANVESL 131

  Fly   123 NFA-LNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDI 186
            :|| ..:.:.:.||:||..:|.|||.:|....|.:.:|.|||:||::|||.|.|||.|:.||||.
  Rat   132 DFAHAAEESEKKINSWVENQTNGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEEDK 196

  Fly   187 FWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTV 251
            ||:.:.....:..|.||.:||:.|.||:....:|:||:..:||||:|||.|..|:..|.|:|...
  Rat   197 FWLNKNTSKPVQMMRQKNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEQLTAD 261

  Fly   252 NLVD--LADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPEGVFVSK 313
            .|::  .|:.:.:.::::..|:|||:...:|...|:.:|:...| :.:|:||. :.|.:|:.|||
  Rat   262 KLLEWTRAENMNMIDLYLSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSG-MSSTQGLMVSK 325

  Fly   314 VLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNK--KNILFAG 368
            ||||:.:||||||||||||||:.:..........|..|.|||::|.:.  .:|||.|
  Rat   326 VLHKSFVEVNEEGTEAAAATGVEVSLTSAQITEDFNCDHPFLFLIKHNATNSILFFG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 134/377 (36%)
Serpinb3aXP_006249702.1 SERPIN 5..387 CDD:294093 135/381 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2400
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3374
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.780

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