DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn42Da

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster


Alignment Length:371 Identity:162/371 - (43%)
Similarity:244/371 - (65%) Gaps:5/371 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE 71
            ||||..|.|:..::..||.....||:||||||||||.|:|..|::.|||.::.:.|...|:.|.:
  Fly    40 EFARRLALFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQ 104

  Fly    72 VAQTFQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINA 136
            :|.:|..||..|::|.:||:|||::|.:|.||:..:...:.:|:.|.|:|::|:.|..||..||.
  Fly   105 IAHSFHQVLAAYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINN 169

  Fly   137 WVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMN 201
            ||..:|...|.:||.||..:..:||||:||:||||:|.|:|::..|..|.|.:..|..|::..|:
  Fly   170 WVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMS 234

  Fly   202 QKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVH 266
            .|.:|.|.....|...|||:||:||||||.::||..:||:.||.|||:...|..:...|...:|.
  Fly   235 LKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVA 299

  Fly   267 VKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAA 331
            :|.|:||.::.:||:|..::||:::||:|||||..:|:|||.:.||.::|||.||||||||||||
  Fly   300 LKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAA 364

  Fly   332 ATGMIMMTRMMTF----PLQFQADRPFLYVIWNKKNI-LFAGAFVK 372
            ||||.:..:....    |::|.||.||.||:.::|:: ||.|:.|:
  Fly   365 ATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQKDLPLFWGSVVR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 157/361 (43%)
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 157/362 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449373
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 1 1.000 - - H21045
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm8430
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
1211.800

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