DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and serpina3

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:349 Identity:108/349 - (30%)
Similarity:193/349 - (55%) Gaps:22/349 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE--VAQTFQF---VLEKYRNSNL 88
            ::|:||||.||.|..::...|::.|:..:|...|.......||  :.:.|:.   ||.:.::...
 Frog    67 QKNIVFSPLSILTAFSMLLLGAKSESHQQILSGLSLNQTQVPEEDMHEAFEHLLQVLNRPKSDLQ 131

  Fly    89 LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNAKTQGKITELVSAD 153
            :::.|.::|::..::..::...|:..||:|....:|.....|.:.||.:||.||:|:|.|||.  
 Frog   132 VKIGNAVFVEDTLKILDSFVQEIEHHYHAEIFPSHFKNPAEAEKQINDFVNNKTEGRIQELVK-- 194

  Fly   154 SFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTA 218
            ..|:.|:||::|.:.|...|.:.||...|....|.|.|...|::..|::...:.:...|.:.|:.
 Frog   195 DLSEATKLVVINFILFNAEWQNPFSSFFTHSRQFSVDENTTVEVQMMSKTDLYQFYKDEKIPCSV 259

  Fly   219 LEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNL---VDLADKLTVEEVHVKFPKFKVDYSLEL 280
            |::||: ::.||.:::| |...|:.:.|.|....|   ...|:|...|   :..|||.:..||:|
 Frog   260 LQLPYK-NNASMLIIVP-ELGKIHEVEEALSVETLKRWTSSAEKSFFE---LFLPKFSISSSLKL 319

  Fly   281 AEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMI-MMTRMMTF 344
            .:.|..:|:..:|||.|:||.:.|:.. :.:|||:|||.:.|.|.|||||||:.:. ::|.:|  
 Frog   320 KDILTDMGMGIIFTDAADFSGISENSR-LKLSKVVHKAVLNVAENGTEAAAASAVEGVLTSLM-- 381

  Fly   345 PLQFQADRPFLYVIWNKK--NILF 366
             :||..|:||:.:|.:::  :|||
 Frog   382 -VQFVVDKPFITLICSQEPYSILF 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 108/349 (31%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 108/349 (31%)

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