DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and serpinc1

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001008153.1 Gene:serpinc1 / 493515 XenbaseID:XB-GENE-975782 Length:456 Species:Xenopus tropicalis


Alignment Length:378 Identity:111/378 - (29%)
Similarity:189/378 - (50%) Gaps:18/378 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EFARGGARFTSELFQ-LLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPP 70
            |.::..|:|....:: |..:....||:..||.||.....:|..|:...|..|:.:..:| .....
 Frog    73 ELSQANAKFAIAFYKNLADSKQNTENIFMSPLSISQAFTMAKLGACNNTLKELMEVFYF-DTISE 136

  Fly    71 EVAQTFQFVLEKYRNSNLLRVANK---------LYVQEGKQLKPAYQSAIKEQYHSEAESINFAL 126
            ..:....:...|. |..|.|.|||         |:.::.......||...:..|.::...:||..
 Frog   137 RASDQIHYFFAKL-NCRLFRKANKSSELVSVNRLFGEKSLTFNETYQDISELVYGAKLLPLNFKE 200

  Fly   127 N-DAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVG 190
            . :.:.:.||.||:.||:.:||:::.....:.:|.|||:||::|||.|..||:.|.|:.:.|:..
 Frog   201 KPELSREIINNWVSDKTEKRITDVIPVGVITPDTVLVLINAIYFKGLWKSKFNSENTKMEQFYPD 265

  Fly   191 EEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVD 255
            |........|.|:..|.|..|:|.|...||:||:..|::|.::||...|.:..:.:.|....|.:
 Frog   266 ESNHCLAATMYQEGIFRYSSFKDDGVQVLELPYKGDDITMVLVLPSPETPLMKVEQNLTLEKLGN 330

  Fly   256 LADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMF-TDQAEFSNLLESPE-GVFVSKVLHKA 318
            ...|....::.|..|:|:|:.|..:.|||:|:|:..:| .:.|:...::.... .::||...|||
 Frog   331 WLQKSRELQLSVYLPRFRVEDSFSVKEKLQQMGLVDLFDPNSAKLPGIVAGGRTDLYVSDAFHKA 395

  Fly   319 TIEVNEEGTEAAAATGMIMMTRMMTF-PLQFQADRPFLYVIWNK--KNILFAG 368
            .:||||||:||||:|.:|:..|.:.. .:.|:|:||||..|...  .::||.|
 Frog   396 FLEVNEEGSEAAASTAVILTGRSLNLNRITFRANRPFLVFIREVAINSVLFMG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 110/372 (30%)
serpinc1NP_001008153.1 serpinC1_AT3 61..455 CDD:381002 111/378 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 221 1.000 Domainoid score I2550
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 221 1.000 Inparanoid score I3452
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.160

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