DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn55B and nec

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster


Alignment Length:366 Identity:128/366 - (34%)
Similarity:201/366 - (54%) Gaps:19/366 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQF 78
            ||:||||:.:.....::||||||||:...:||.:..|.|:|..|:.||..|..| ...|||.|:.
  Fly   109 RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKN-AMAVAQDFES 172

  Fly    79 VL--EKYRNSNLLRVANKLYV-QEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNA 140
            |:  :|:.....|.:|.|:|. :|...:..:|....|..:.:..|:::.......|..|||||..
  Fly   173 VIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMD 237

  Fly   141 KTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAK 205
            .|:.||.:||:.......|:.:|:||::|:|.|.|:|:...|....|........|:..|     
  Fly   238 TTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMM----- 297

  Fly   206 FN---YGFFE--DLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLK--TVNLVDLADKLTVE 263
            ||   ||..|  :||.||||:.|:||..||.:|||.|.||:..:.::|.  ..:|..:|.:|..:
  Fly   298 FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQ 362

  Fly   264 EVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTE 328
            .|.|:.|||:.::..::.|.||.||:.:|||..::.:.|::.|  |.|||:|.||.|.|.|.|||
  Fly   363 SVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQP--VRVSKILQKAYINVGEAGTE 425

  Fly   329 AAAAT-GMIMMTRMMTFPLQFQADRPFLYVIWNKKNILFAG 368
            |:||: ...:...:...|.:|.|:|||::.:....::||.|
  Fly   426 ASAASYAKFVPLSLPPKPTEFVANRPFVFAVRTPASVLFIG 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 128/366 (35%)
necNP_524851.1 SERPIN 108..468 CDD:238101 128/366 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449391
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
98.750

Return to query results.
Submit another query.