DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn27A

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster


Alignment Length:354 Identity:117/354 - (33%)
Similarity:186/354 - (52%) Gaps:22/354 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ENVVFSPFSIQTCIAL--AFAGSQGETADEIAKALHFVSNFPPEVAQTFQFVLEKYRNSN----L 88
            :||:.||||::..:||  ..||:..:|..|:|.....:.: ...|.:.::..|..::..|    .
  Fly    92 KNVIISPFSVKLVLALLAEAAGAGTQTQVELANTQTDIRS-QNNVREFYRKTLNSFKKENQLHET 155

  Fly    89 LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNAKTQGKITELVSAD 153
            |.|..||:.....:.:..:.:.:|..|.||.|:::|...:|||.|||||....|||::.:||:.|
  Fly   156 LSVRTKLFTDSFIETQQKFTATLKHFYDSEVEALDFTNPEAAADAINAWAANITQGRLQQLVAPD 220

  Fly   154 SFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTA 218
            :...:. ::|.|.::|.|.|..:|:  .|.:..|:..:::|.:..:|.|...|.|...|.|....
  Fly   221 NVRSSV-MLLTNLIYFNGLWRRQFA--TTFQGSFFRSKDDQSRAEFMEQTDYFYYTTSEKLKAQI 282

  Fly   219 LEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHVK--FPKFKVDYSLELA 281
            |.:||:..: |:|||||....||:.|.:.|:...|  .:.:..:|||.||  .|||..||...|.
  Fly   283 LRLPYKGKN-SLFVLLPYALNGIHDLVKNLENDEL--KSAQWAMEEVKVKVTLPKFHFDYQQNLK 344

  Fly   282 EKLKQLGITKMFTDQAEFSNLLESPE---GVFVSKVLHKATIEVNEEGTEAAAATGMIMMTRM-- 341
            |.|:.||:.::|.|.|....|....:   .|.||.:|.||.|.|||:||||.|||.:.:..:.  
  Fly   345 ETLRSLGVREIFEDSASLPGLTRGADVAGKVKVSNILQKAGINVNEKGTEAYAATVVEIENKFGG 409

  Fly   342 MTFPLQFQADRPFLYVIWNKK--NILFAG 368
            .|...:|..:|||::.|..:.  ||||||
  Fly   410 STAIEEFNVNRPFVFFIEEESTGNILFAG 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 117/354 (33%)
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 117/354 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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