DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn43Aa

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:367 Identity:127/367 - (34%)
Similarity:214/367 - (58%) Gaps:16/367 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPE-VAQTFQF 78
            |.:||||.|:.....|||:.||.|||..:.||:.|::|.||.|:.|.||..:....: :|:::..
  Fly    30 FATELFQTLATDRQDENVIISPVSIQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESYHN 94

  Fly    79 VLEKY-RNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAINAWVNAKT 142
            :|..| ::..:|.:|||:|.::...:...::...::.:.||.|.::|:....|.:.||.||..:|
  Fly    95 LLHSYIKSKTVLEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDFSRETEAVEQINRWVKQQT 159

  Fly   143 QGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFN 207
            :.||..:|  :|...:|.:.|:||::||..||..|::|.|.:..||:.|...:::..|.....:.
  Fly   160 ENKIERVV--ESLEPDTNVALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNWYY 222

  Fly   208 YGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHVKFPKF 272
            |..:.:|...|:|:.:::.:|:|:.:||.:|:|:.||.:|||.|:...|.|:...:.|.|..|||
  Fly   223 YADYPELDAKAIELFFENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQWQSVSVYLPKF 287

  Fly   273 KVDYSLELAEKLKQLGITKMFTDQAEFSNLL-ESPEGVFVSKVLHKATIEVNEEGTEAAAAT--- 333
            |.::..:|...|.::||:.||:|.|:|||:. :||.|..::||.||..|:|||.|.|||.|:   
  Fly   288 KFEFDTDLRPTLHKMGISAMFSDAADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAA 352

  Fly   334 GMIMMTRMMTFPLQ---FQADRPFLYVIWNKKNILFAGAFVK 372
            |:     .|:.||.   |.||.||.::|.:|..:.|.|..||
  Fly   353 GV-----PMSLPLDPKTFVADHPFAFIIRDKHAVYFTGHIVK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 125/363 (34%)
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 125/363 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449394
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm8430
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
1110.800

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