DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn43Ab

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:356 Identity:114/356 - (32%)
Similarity:189/356 - (53%) Gaps:8/356 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVAQTFQFVLE 81
            ::|:..::|..|.||||.||.:||:.:||||.|::|:||.|:.:.|.........|:|......:
  Fly    34 ADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQ 98

  Fly    82 KYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINF--ALNDAAAQAINAWVNAKTQG 144
            .....|..|:||.:|:.|..:.|.:::...:.|:.|..:.::|  ..|...|..||..|..||.|
  Fly    99 ALTRDNNFRLANNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNG 163

  Fly   145 KITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKINYMNQKAKFNYG 209
            |||:::.|:..:|.|..|::|.:.:..:|...|..::||:..|..|..:.||::.|.....|||.
  Fly   164 KITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYA 228

  Fly   210 FFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVEEVHVKFPKFKV 274
            ....|....:|:|||:.|.||.:|||..:.|:.:|.:.|...||:.....::.::|.|..|||.|
  Fly   229 EVNSLDAKVVELPYQNPDFSMLLLLPNRKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKFSV 293

  Fly   275 DYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMI--M 337
            .:.|.|....|:||:..||:...:|.|:.......|::.|.|||.:||.|.|.:....||::  :
  Fly   294 TFGLGLEGPFKKLGVHTMFSRDGDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLLKGL 358

  Fly   338 MTRMMTFPLQFQADRPFLYVIWNKKNILFAG 368
            .:|..    :|:||.||::.|..|.:|.|.|
  Fly   359 FSRSK----KFEADHPFVFAIKYKDSIAFIG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 114/356 (32%)
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 114/356 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449385
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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