DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn88Eb

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:402 Identity:106/402 - (26%)
Similarity:192/402 - (47%) Gaps:57/402 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DFNLEFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSN 67
            ||:|...:       ::.::..:|    |:.|||||....:.||:..|..:|..|:|:||:.   
  Fly    40 DFSLALMK-------QIREIYPSG----NLFFSPFSTYNALLLAYFSSSEQTERELAQALNL--- 90

  Fly    68 FPPEVAQTFQFVLEKY-----------RNSNL-LRVANKLYVQEGKQLKPAYQSAIKEQYHSEAE 120
               ..|...|.||..|           |.|.: |..||:::|.....:...:.:.:    :...:
  Fly    91 ---GWALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLL----YGATK 148

  Fly   121 SINFALND--AAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTE 183
            .::|. ||  ...:.||.|:..||..:|.:::|::..:.:|.|||.||.:.||.|..:|..|.|.
  Fly   149 ELDFK-NDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETA 212

  Fly   184 EDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQ---------------DSDLSMFVL 233
            ...|::.|.||..:..|::...|.....|.|....:::||:               .||:||.::
  Fly   213 LKPFFINEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIII 277

  Fly   234 LP-QERTGIYALAEKLKTVNLVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQA 297
            || ..:..:..:..:|...::....::...:::.:..|||:.:..|||...|..:|:..|||..|
  Fly   278 LPNSNKISLNRVISRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNA 342

  Fly   298 EFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTR--MMTFPLQFQADRPFLYVIWN 360
            .|.:|...|..:.:....|.|.|:|:|.|:.||||| :::::|  ....|.:|..:.||:::|::
  Fly   343 TFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAAT-ILLVSRSSRQPDPTKFNCNHPFVFLIYD 406

  Fly   361 KK--NILFAGAF 370
            :|  .|||||.:
  Fly   407 EKVDTILFAGVY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 101/386 (26%)
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 106/402 (26%)

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