DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Spn77Bb

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:351 Identity:85/351 - (24%)
Similarity:152/351 - (43%) Gaps:39/351 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FAGSQGETADEIAKALHFVSNFPP-----EVAQTFQFVLEKYRNSNLLRVANKLYVQEGK-QLKP 105
            :.|::|.|.:|:...|....::|.     |..:.:.::  ...|:.|..:....|...|. :|..
  Fly    18 YEGAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAYHYL--NSENTKLFSLRYAYYDDVGDLELVK 80

  Fly   106 AYQSAIKEQY--------HSEAESINFALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLV 162
            .|.|.:.|..        ......::|  :..|:..||..::..:..||....|..||:....::
  Fly    81 GYNSVVLEGVGEGNVVLREGRPRGVDF--DQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVL 143

  Fly   163 LLNALHFKGSWAHKFSEERTEEDIFW-VGEEEQVKINYMNQKAKFNY-GFFEDLGCTALEMPYQD 225
            .:...:||..|.:.|.:.:|:.:.|: .|.....|:..|.|..|:.| ...:.|....||:|:.:
  Fly   144 GITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPFGE 208

  Fly   226 SDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVE----EVHVKFPKFKVDYSLELAEKLKQ 286
            .:|.|.||||:...|:..:..:||.:.|..|.:||...    :|.||.|||.....|.|.:.:..
  Fly   209 HELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDTVYD 273

  Fly   287 LGITKMFTDQAEFSNLLES--PEGVFVSKVLHKATIEVNEEGTEAAA---ATGMIMMTRMMTFPL 346
            .|:|.:..|.|:...||.:  ..|..::.....|.|.|:|||...|.   ::|        ...:
  Fly   274 AGLTDLRNDFADLDKLLIAIGHRGACLTLYHQFARIVVDEEGLPNAVPQKSSG--------KNNI 330

  Fly   347 QFQADRPFLYVIWNKKN--ILFAGAF 370
            :|..:|||.|::..||:  ::.:|.|
  Fly   331 KFHVNRPFAYLVLQKKHKLLIHSGVF 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 83/347 (24%)
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 85/351 (24%)

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