DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and serpinf1

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_989086.1 Gene:serpinf1 / 394686 XenbaseID:XB-GENE-945026 Length:409 Species:Xenopus tropicalis


Alignment Length:380 Identity:96/380 - (25%)
Similarity:176/380 - (46%) Gaps:45/380 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVA 73
            |...:.|..:|:::.:......|::.||.||.|.::....|....|...|.::|::.....|||.
 Frog    45 ASSASNFGYDLYRMQANKNPNSNIIISPLSIATSLSSLSLGGGQRTESLIQRSLYYDLLNDPEVH 109

  Fly    74 QTFQFVLEKYRN-SNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAE----SINFALNDAAAQA 133
            .|::.:|..:.: ::.|:...::.::...:|:..:.:.:::.|.::.:    |....|.:|    
 Frog   110 ATYKDLLASFTSQASGLKSTWRIMLERRLRLRMDFVTQVEKFYGNKPKVLTGSTRLDLQEA---- 170

  Fly   134 INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKIN 198
             |.::..:||||:.:...  ....:..::||...:.||.||:||:...|.:..|.:.|:..|.:.
 Frog   171 -NDFIQKQTQGKVVKFFK--EIPTSVSILLLGTTYLKGQWAYKFNPRETVQREFHLDEQTSVTVP 232

  Fly   199 YMNQK-AKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTV 262
            .|:.| ....||...|..|..:::|. ...:|:...||           ...|.||..:.:.||.
 Frog   233 MMSSKNIPVRYGLDSDFNCKIVQLPL-TGGVSIMFFLP-----------NTVTQNLTMIEEGLTS 285

  Fly   263 EEVH------------VKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVL 315
            |.||            :..||.|::|..||.|.|::..:..:|. ..:||.:...|  :.:|.|:
 Frog   286 EFVHDIDQALQPINLVLSVPKLKLNYEAELKEALQESKLQSLFA-TPDFSKISSKP--LKLSYVV 347

  Fly   316 HKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKKN--ILFAG 368
            ||||:|:||||.|.|...   ..:....|||::..|.|||:|:....|  :||.|
 Frog   348 HKATLELNEEGAETAPKP---EDSHRNYFPLEYHLDHPFLFVLRANDNGALLFIG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 95/376 (25%)
serpinf1NP_989086.1 serpinF1_PEDF 31..402 CDD:381008 96/380 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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