DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and serpinf1

DIOPT Version :10

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_989086.1 Gene:serpinf1 / 394686 XenbaseID:XB-GENE-945026 Length:409 Species:Xenopus tropicalis


Alignment Length:380 Identity:96/380 - (25%)
Similarity:176/380 - (46%) Gaps:45/380 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHFVSNFPPEVA 73
            |...:.|..:|:::.:......|::.||.||.|.::....|....|...|.::|::.....|||.
 Frog    45 ASSASNFGYDLYRMQANKNPNSNIIISPLSIATSLSSLSLGGGQRTESLIQRSLYYDLLNDPEVH 109

  Fly    74 QTFQFVLEKYRN-SNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAE----SINFALNDAAAQA 133
            .|::.:|..:.: ::.|:...::.::...:|:..:.:.:::.|.::.:    |....|.:|    
 Frog   110 ATYKDLLASFTSQASGLKSTWRIMLERRLRLRMDFVTQVEKFYGNKPKVLTGSTRLDLQEA---- 170

  Fly   134 INAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDIFWVGEEEQVKIN 198
             |.::..:||||:.:...  ....:..::||...:.||.||:||:...|.:..|.:.|:..|.:.
 Frog   171 -NDFIQKQTQGKVVKFFK--EIPTSVSILLLGTTYLKGQWAYKFNPRETVQREFHLDEQTSVTVP 232

  Fly   199 YMNQK-AKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTV 262
            .|:.| ....||...|..|..:::|. ...:|:...||           ...|.||..:.:.||.
 Frog   233 MMSSKNIPVRYGLDSDFNCKIVQLPL-TGGVSIMFFLP-----------NTVTQNLTMIEEGLTS 285

  Fly   263 EEVH------------VKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVL 315
            |.||            :..||.|::|..||.|.|::..:..:|. ..:||.:...|  :.:|.|:
 Frog   286 EFVHDIDQALQPINLVLSVPKLKLNYEAELKEALQESKLQSLFA-TPDFSKISSKP--LKLSYVV 347

  Fly   316 HKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVIWNKKN--ILFAG 368
            ||||:|:||||.|.|...   ..:....|||::..|.|||:|:....|  :||.|
 Frog   348 HKATLELNEEGAETAPKP---EDSHRNYFPLEYHLDHPFLFVLRANDNGALLFIG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 94/372 (25%)
serpinf1NP_989086.1 serpinF1_PEDF 31..402 CDD:381008 96/380 (25%)

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