DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn55B and Serpinb3d

DIOPT Version :9

Sequence 1:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_958764.1 Gene:Serpinb3d / 394252 MGIID:2683295 Length:387 Species:Mus musculus


Alignment Length:382 Identity:133/382 - (34%)
Similarity:210/382 - (54%) Gaps:24/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAGSQGETADEIAKALHF-------- 64
            ||....:||.||::.|...  ..|:.:||.|:...:|:...|::..|..:|.|.|||        
Mouse     4 FAVATTKFTLELYRQLRES--DNNIFYSPISMMRTLAMLLLGAKANTEQQIKKVLHFNETTKKTT 66

  Fly    65 ----VSNFPPEVAQTFQFV---LEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESI 122
                .|:....|.|.||.:   |.|:.|:..|:|.|.:|..:.......:...|::.|.:..||:
Mouse    67 EKSAESHDEENVHQQFQMLMTQLNKFNNAYDLKVPNSIYGAKDFPFLQTFLKDIRKYYQANVESL 131

  Fly   123 NFA-LNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEEDI 186
            :|| ..:.:.:.||:|:..:|.|||.:|..:.|.:.:|.|||:||::|||.|.|||.|:.|.|:.
Mouse   132 DFAHAAEESQKKINSWMARQTNGKIKDLFPSGSLNSSTILVLVNAVYFKGQWNHKFDEKHTREEK 196

  Fly   187 FWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTV 251
            ||:.:.....:..|.|:.|||:.|.|::....:|:||:..:||||||||.|..|:....|:|...
Mouse   197 FWLNKNTSKPVQMMKQRNKFNFIFLENVQAKIVEIPYKGKELSMFVLLPVEIDGLKKFEEQLTAD 261

  Fly   252 NLVD--LADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQ-AEFSNLLESPEGVFVSK 313
            .|:.  .|:.:.:.|:::..|:|||:...:|...|:.:|:...|..| |:||.:..| :|:.|||
Mouse   262 KLLQWTRAENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQKADFSGMSNS-QGLVVSK 325

  Fly   314 VLHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQFQADRPFLYVI-WNKKN-ILFAG 368
            ||||:.:||||||.|||.|..:...:..:..|..|..:.|||:|: .||.| |||.|
Mouse   326 VLHKSFVEVNEEGAEAATAMSVESRSLSVPKPNDFSCNHPFLFVMKQNKTNSILFFG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 131/377 (35%)
Serpinb3dNP_958764.1 SERPIN 7..387 CDD:294093 131/379 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2402
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 232 1.000 Inparanoid score I3415
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.780

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